Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1917 ATGGATCCCAAGGGCTCAAACAAGCCGGATGAGGCACCCAACAACAAGTTCTTGAGTCTCCCACGGCTACAATCCAACATGGGAGAGAACAACAATAAAGGAGCAGCCGAAGTGAGGGATTTCCAGATTTCGATCGCAGAGAAAGAAGAAAACAGCAAGAACAAGCAGTTAGCCCCCAAGAGAGCTTCCAACAAAGATAGACACACCAAGGTGGAAGGCAGAGGAAGAAGAATAAGGATGCCTGCTCTATGTGCGGCTAGAATCTTTCAGTTAACCAGAGAATTGGGTCACAAATCCGACGGGGAAACCATACAGTGGCTCCTCCAGCAGGCGGAGCCGTCCATAATCGCCGCAACCGGAACGGGGACAATACCGGCATCTGCTTTAGCTACAGCAGGGGGCTCTGTTTCACAAGAGGGGACCTCTCTATCTGCAGGACTACACCAAAAAATGGATGAATTAGGGGGGTCCAATATAGGGCCAGGAAGTAGGACCAGCTGGGCAATGGTTGGGGGAAATTTGGGGAGACCCCATGTGGCCACAGGTCTATGGCCGCCTTCTGTCACTGGATTTGGGTTTCAGTCACCATCATCTTCTGCTCCATCTGCACCGAGTTTAGGGACTGAGAGTTCAAATTACCTTCAAAAGATTGGGTTCCCTGGCTTTGATTTGCCTGCGGCAGCAGCCACTAACATGGGTCCTATGAGTTTTGCCTCAATTTTGGGTGGGACTAGTAGCCAGCAGATTCCTGGTTTGGAGTTGGGGCTGTCTCAGGATGGTCATATTGGTATTTTGAACCCACAAGCCTTAAGCCAGATTTACCAGCAGATGGGTCAAGCTAGAGTACACCTACAGCAGCATCAGAATCCTCCTCCTAAGGATGATTCTCAAGGTTCTGCAGGACAATAG 909 0.5017 MDPKGSNKPDEAPNNKFLSLPRLQSNMGENNNKGAAEVRDFQISIAEKEENSKNKQLAPKRASNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALATAGGSVSQEGTSLSAGLHQKMDELGGSNIGPGSRTSWAMVGGNLGRPHVATGLWPPSVTGFGFQSPSSSAPSAPSLGTESSNYLQKIGFPGFDLPAAAATNMGPMSFASILGGTSSQQIPGLELGLSQDGHIGILNPQALSQIYQQMGQARVHLQQHQNPPPKDDSQGSAGQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1917 302 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 194 IPR005333 GO:0003700
Alju03g1917 302 ProSiteProfiles TCP domain profile. 64 118 IPR017887 -
Alju03g1917 302 MobiDBLite consensus disorder prediction 278 302 - -
Alju03g1917 302 MobiDBLite consensus disorder prediction 18 32 - -
Alju03g1917 302 Pfam TCP family transcription factor 63 148 IPR017887 -
Alju03g1917 302 MobiDBLite consensus disorder prediction 42 72 - -
Alju03g1917 302 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1917 Alju-ChrAlju03 46891500 46892408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1917 1 274 TCP Transcription Factor Family AT3G27010 54.608 1.34e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju03g1917 TCP 9.8e-31 No_clan