Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1912 ATGGAGAATTATACCATGCTGTTCCCTGGCCCTCCTTCTTCCTCTTCAAGCTATCAAATGCCAACAAGTTCCATGGGAGGCTCTTATTATCATGGATTTGGTAACAACTTTGAGGGCCAAATCTCGAATAGGCTTCTGGGTTTGAGGCCTGCTGATGAGAAAAGAGGGGAAGTTTCTCTTCAGAGCGGAAATGTGAAGGAAGATGAAGGTAAAGGGAAAAAGAAAGGAGAGAAGAAGGTTAGAAAGCCAAGATTTGCTTTCCAAACAAGGAGCCAGGTTGACATTCTTGACGATGGCTACAGGTGGAGAAAATATGGTCAGAAAGCTGTTAAAAACAACAAATTCCCCAGGAGCTACTACAGATGTACACATCAAGGGTGCAATGTGAAGAAGCAAGTGCAGCGTCTAACGAAAGACGAAGGGGTAGTGGTGACCACTTATGAAGGAGTTCACACTCATCCTATTGACAAGACAACCGACAACTTCGAACACATCTTAAGTCAGATGCATATATACACTCCCTTTTAA 528 0.4337 MENYTMLFPGPPSSSSSYQMPTSSMGGSYYHGFGNNFEGQISNRLLGLRPADEKRGEVSLQSGNVKEDEGKGKKKGEKKVRKPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIDKTTDNFEHILSQMHIYTPF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1912 175 FunFam WRKY transcription factor 57 81 156 - -
Alju03g1912 175 MobiDBLite consensus disorder prediction 52 75 - -
Alju03g1912 175 SUPERFAMILY WRKY DNA-binding domain 88 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1912 175 Pfam WRKY DNA -binding domain 97 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1912 175 Gene3D WRKY domain 81 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1912 175 ProSiteProfiles WRKY domain profile. 91 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1912 175 SMART WRKY_cls 96 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1912 175 MobiDBLite consensus disorder prediction 1 22 - -
Alju03g1912 175 MobiDBLite consensus disorder prediction 8 22 - -
Alju03g1912 175 MobiDBLite consensus disorder prediction 52 84 - -
Alju03g1912 175 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 158 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1912 Alju-ChrAlju03 46852759 46854190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1912 84 175 WRKY Transcription Factor Family AT5G13080 84.783 5.58e-57 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju03g1912 WRKY 1.5e-26 CL0274