Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1911 ATGGAGTGGTACTCAAGAGAGTCAGTGTGGGATCCACTGAGAGGTCAGCCAAACGTTGGAGAAGCGTCGGTGGAGAAATCAGTGTCAGTTGCGGAGACAGAGATGTCGAATTCAAAATCATCATCATCAAAGACGAAGAAGCGCGTGTACCAAAAATCGCCGGAGAAGGTTAAGTGCTCGGTGGATGGATGCAACTTTGACCTGGGGACTTGCCGGGATTATCACCGGCGGCACAGGGTGTGTCAACCTCACTCCAAGACCTCTTGTGTGCTTGTGCAGGGACAGGAACAGAGATTCTGCCAGCAATGCAGCAGATTTCAATCGCTGGATGAGTTTGATGGCTTCAAGCGGAGCTGTAGGAGACGTTTAGAGGGCCATAATAAACGCAGAAGGAAACCTCGTCCTTCACCTCTCTCCTTCTCTGCAGATTACAAAGGACCCAGAATCCTGCAATTTGGAAATCCTACAAGTGATGATCGTTACGTGAGCATGTGGAGTTCTCAACCTGGTGGGAGCTGCTATAATCGTTACCCACCAATTCTGTCAAAGATTGAGATTGAGCAACAGAGTAGTATGGAAGGTCGTGCATTTGCCAACATAGAAAATATGCAGGTGAATAATGGGAATGAAGGAGAAAGGAGAGGATTAAGCATGTATTGGTTTAATAATAATAATAATAATGAAGCAGTTCCGGCATTAGCAGCTGTATCAGCAGAAGCTGGAATCGGAGACAAGAACCACAAGATGCCTTCGGATTCTGCTCTCTATCTTCTGTCAGCACTTCAGGCACAGAGTTCCTCCGAGTTTAGTATGGTAGATTCTTGTGTAGATTGTCCAGTTCAATCCCAGCCTTTATTTGAAGAAGACGATGGGACCCTAAACTGTTCGAGTTCCAGGAGATTGGGAGTGAAACCTAATGAAAGAGAGTTTGATCACAATGGGATGATTCAAATGGAGCCCCAGGTGATGGAGCACAGGGCAGGAGGATCACTCACGTTCCCTTCTTCCTGGGAGTAA 1017 0.468 MEWYSRESVWDPLRGQPNVGEASVEKSVSVAETEMSNSKSSSSKTKKRVYQKSPEKVKCSVDGCNFDLGTCRDYHRRHRVCQPHSKTSCVLVQGQEQRFCQQCSRFQSLDEFDGFKRSCRRRLEGHNKRRRKPRPSPLSFSADYKGPRILQFGNPTSDDRYVSMWSSQPGGSCYNRYPPILSKIEIEQQSSMEGRAFANIENMQVNNGNEGERRGLSMYWFNNNNNNEAVPALAAVSAEAGIGDKNHKMPSDSALYLLSALQAQSSSEFSMVDSCVDCPVQSQPLFEEDDGTLNCSSSRRLGVKPNEREFDHNGMIQMEPQVMEHRAGGSLTFPSSWE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1911 338 MobiDBLite consensus disorder prediction 29 44 - -
Alju03g1911 338 SUPERFAMILY SBT domain 57 138 IPR036893 GO:0003677|GO:0005634
Alju03g1911 338 MobiDBLite consensus disorder prediction 1 49 - -
Alju03g1911 338 Gene3D - 49 120 IPR036893 GO:0003677|GO:0005634
Alju03g1911 338 ProSiteProfiles Zinc finger SBP-type profile. 56 133 IPR004333 GO:0003677
Alju03g1911 338 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 32 254 IPR044817 GO:0003677
Alju03g1911 338 Pfam SBP domain 59 132 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1911 Alju-ChrAlju03 46833577 46834787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1911 59 152 SBP-box Gene Family AT5G50670 56.122 4.65e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju03g1911 SBP 2.2e-28 No_clan