LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g1898	ATGGCAGCCGAAGAAGTTCATCATCTTCATAACTCAACATCATGGACCAACCCCAAGGTAGTATGCTATGAATTAGGAGCAAGCAATGGCAATAGAATATGGAAAAGTGGTGCCGTCCAGGAAGAAGAGGGCCAACTCTTGTGTTTGCAGATCGCCTACACCGTCTCCGTCTCTAGTCTTATCTACTACTTCCTCAAACCTTTTCATCAGCCTCGTATGGTTGCAGAGATTCTCGCCGGTTTCACTCTAAGTCCTCTTTGTTTGGAACGTACCATAGTAGGGAAGACGCTTTTGGCTCCAAGAGGAATCCTCAATATCGATACCTTAGCTAATCTTGGGCTCGTGAGCTATGTCCTTCTGAGCGGTTTAGAAATGAACTTAGATGCGGTTCTACGAATCCGAAGGAAGGCCATAGGCATTGCCGTCGCCGGGATTATCATTCCGGTGGGGATTGGGATGGGCTTTTTGGCCATGTTACGGCATTACCATGAAAGGACTTCTGTAGAAACTCCTGAGAAATATATCGTTCATGCATATTTATTCTGGAGTTTGGCTCTAGCCATCACAGGCTTCCCAATCCTTGCTCGAATCCTTACTAATCTCAAGCTCCTCAATACCAATCTAGGAAGAATCGCTCTAACCACAGCTATGATCGGCGACGCCTACGGTTGGCTTTTGTTCATAATGTTGGTTCCATTTGCCAGCAATGATGCAGCTAGACCATTACTGTCGATGATAAGTACCTTATTGTTCATCCTTATCTGCTTCTTTGTCGTCCGTCCTATCATTACCCGATACATTAATCACAAGACCGACACAGATTCATGGGAGAATTCTCAGCTGGCCGTTACGGTGATGTTGGGCTCTGTCGTTTGTTCTTGTATCACAGATATACTTGGCACACACGCCATTGTTGGAGCTTTTGTGTATGGGCTTATTTTACCTAATGGGAAATTTGCTGATCTGGTGATGGGCAAGGTGGATGATTGTATTTCTGGGATTATGTCGTCACTTTTCTTCTTTCGTACTGGCTTCACAATTAACTTGGCCACGGTTGCGCAACAAAAATATTGGGCCTTGATGACCCTGGTTATCTTCCTTCTCTTCACCCCCAAAGTCTTGAGCACCTTGATAGCCACCTTCTTCTTCAATATACCAGCCCGAGATGGCTTAGGTATTGGACTACTTCTCAACACCAAAGGCGTCTTGGCTCTCATAATTCTAAACACAGCCTGGGATAGAAAGATTCTATCTGCGGTATATTTCACAATTATGGTGTCTGCGGTTTTTTTGATGACGATGATGGCGCCTATTTTCATCAGCGTCATATACCACCCAAGAAAGCGTTCTGAGATGTATAAGTTAAGGGCTGTGCAAAAGCTAAGGCCAGAGACAGAACTTCGAATCCTTGTTTGTGTCCATAACGTTCGCCAAGCTGCGGGCATGGTCAGCGTCTTGAAAAACTGTAAAGCCACCAGAATTTCTCCCATGCATGTGTTCGGAGTTCGTATGGTTGAGTTTAAGGGCCGGGCGGCGGCCGCCGCCACCCTTTTCGCCTCCCATATGGAACAGCCGTACCTCACCGGATCACCAAGCAGGGCCACAGCATCACAAAGTGAGTCAGACATCATCGCCGGTACCTTCAAAGTTCTGTCAGAATGGAACAACGCCGTTAGAGTAGAAACCACCGATGCTATGTCGGTGTATGAGACAATTCATGATGATATATCCAGCCTGGCACAGCAAAAACTAACGTCGTTAGTTCTGCTTCCCTTTCACAAGCAAGCAGAAGTGGAAGGTGGTCTGGAGACAGAAAACGCTATATACAAAGACATAAACGAGAATGTTCTGCAAAATCCTCCTTGTTCTGTTGGAATCTTCATTGATCGTGGTCTTGGAACATCGTCCACCAAAATGAACACGAGCATTCTAACGCTCTTCGTCGGTGGTCCTGACGACCGTGAAGCCTTGGCCGTTACCTGGAGAATGGCCGGCCAGCCAGGGACACAACTCACCGTCGTACGGATTGTTCTGTATGGTGAAGCTGCAGATGATGTATCAGTCAGCAATGATTCTTCTCAGTGGCTAACTTCTGCAATAATGGACGAAGAGAAGCAAAAGATGTTAGATGACGAGTATTTAGACTCGTTCAGGCTCAAGATGGTTCACAATAATGAAATCGTTACATATTCAGAGGAAGACGTGGGCAGTGGTGAGGAGTTGACGTCACTTATGCAGGAATTTGGTAATGATGATTATGATTTGATAATTGTTGGACGAGGGAATCATAGGAACTCAGTGTTGTTTTCAAAATTATTGGAATGGTGTGACAACCCAGAATTGGGAGTGTTAGGGGACATAGTGGCGTCGAATAATTTTGGTTCCCAATCTTCGTTGCTTGTGGTGCAGCAATATGAATCTACGGCGATGAGCGGCGGGGCTCAAACTCGACCACCCATTAGACAAACCACGACACATAGTGATGGTTCTGAGGCCCATTTTGTGTAA	2508	0.4585	MAAEEVHHLHNSTSWTNPKVVCYELGASNGNRIWKSGAVQEEEGQLLCLQIAYTVSVSSLIYYFLKPFHQPRMVAEILAGFTLSPLCLERTIVGKTLLAPRGILNIDTLANLGLVSYVLLSGLEMNLDAVLRIRRKAIGIAVAGIIIPVGIGMGFLAMLRHYHERTSVETPEKYIVHAYLFWSLALAITGFPILARILTNLKLLNTNLGRIALTTAMIGDAYGWLLFIMLVPFASNDAARPLLSMISTLLFILICFFVVRPIITRYINHKTDTDSWENSQLAVTVMLGSVVCSCITDILGTHAIVGAFVYGLILPNGKFADLVMGKVDDCISGIMSSLFFFRTGFTINLATVAQQKYWALMTLVIFLLFTPKVLSTLIATFFFNIPARDGLGIGLLLNTKGVLALIILNTAWDRKILSAVYFTIMVSAVFLMTMMAPIFISVIYHPRKRSEMYKLRAVQKLRPETELRILVCVHNVRQAAGMVSVLKNCKATRISPMHVFGVRMVEFKGRAAAAATLFASHMEQPYLTGSPSRATASQSESDIIAGTFKVLSEWNNAVRVETTDAMSVYETIHDDISSLAQQKLTSLVLLPFHKQAEVEGGLETENAIYKDINENVLQNPPCSVGIFIDRGLGTSSTKMNTSILTLFVGGPDDREALAVTWRMAGQPGTQLTVVRIVLYGEAADDVSVSNDSSQWLTSAIMDEEKQKMLDDEYLDSFRLKMVHNNEIVTYSEEDVGSGEELTSLMQEFGNDDYDLIIVGRGNHRNSVLFSKLLEWCDNPELGVLGDIVASNNFGSQSSLLVVQQYESTAMSGGAQTRPPIRQTTTHSDGSEAHFV	835

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g1898	835	Gene3D	-	45	453	IPR038770	-
	Alju03g1898	835	PANTHER	CATION/H + ANTIPORTER	45	807	-	-
	Alju03g1898	835	MobiDBLite	consensus disorder prediction	810	835	-	-
	Alju03g1898	835	Pfam	Sodium/hydrogen exchanger family	55	443	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g1898	Alju-ChrAlju03	46787872	46791538	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g1898	16	805	Antiporter Super Family	AT2G13620	36.967	3.20e-178	532