Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1881 ATGACTGTCCTTCACATGATATTCAAGTATGAGCATACAAAGAAGCAGATTTGTGATGTTAAACTCAGATTGCTGATCCCATTGAGACGTTCCTGCCAATCTTTTGACCAAGTTAGTCCGAACCCAAGATATTTGATCGTTCACCTATCCGCTAAACCATGTCTTAGTCCACACAAGAAGTCAAATATGTGGAGCGCTGAACTCTGTATTGGTTTAGCTGCGGGTCTAGTTGGGATTTGCATTGTTTTTGCAGCAGCCATCATTGTAATCAGATTAAAGAACAAAAGGGAAGGGAATGGGATTGGGAAAGGAAGAGACTTGGAGCTTCAGCATCTCAACCTCAGTGTAAGAACAACCTGCGACAAGAAGGTTTCTTTTGAGGGATCCCCTGACACTCTTAAAGGCAAAATCATCGACACCACACCACGTAGGATGCTCCTGGAGACATACACTATTGAAGAGTTAAGAAAAGCGACTGAGGACTTCAGTTCAACTAATCAAATTCAGGGACCTGTGTTTCATGGTCGTCTCAATGGGAAGAACATGGCAATCAAGCGCGCAAACACAGAGACACTGACAAAGATAGATTTTGGACTCTTCAATGAAGCACTTCACCACCACCCCAACATCCTTAAACTCCTCGGAACGTGCTCAACTGATGATGAGGATCCTGAATCATATCTGGTTTTTGAATTCGCAGAAAATGGATCTCTGAGAGACTGGCTTCACGGTGGGCTGGCCATCAAGAACCAGTTCATTGCTTCCTGCTATTGTTTCCTTTCATGGAGCCAGAGGCTAAGGATCTGCCTTGACGTGGCCATGGGTTTGCAGTATATGCACCACGTGATGAACCCAAGCTACGTCCATAGAAATGTGAAGAGCAGAAACATATTTTTAGACGAAGACTTTGGTGCCAAGTTAGGGAATTTTGGGATGGCAGGGTGTGTTGAGAATGAACCCGAGGACCCACTTTCACATTTAACGAATCCCGCTTCTTGGAGCCTAGGTTATTTGGCACCTGAATATGTGCACCAAGGTACAGTTTCCCCAAGTATTGATATTTTTGCTTATGGGGTAGTTTTGCTGGAGATGTTATCAGGTCAAACACCTATAAGCAAGCCTAATGAGAAAGGAGAAGGAAGTGTTTGGCTTACTGAGAAAATCAAGTCCATTTTGAAGTCAGAGAATATGGATGTACTAAGAGATTGGATGGACAGTGCATTGGGTGAGAATTACTCATTCGATGCAGCTATCACAGTTGCAAAACTTGCAAGAGCTTGTGTAGATGAAGACTCCTCTCGCAGGCCATGTGCTGGTGAAGTTGTTGAGAAGCTATCAAGATTGGTTGAGGAATTTCCTGAAGAAGATCATTTATTTTTGTCTGAAAGCTCAACAAAACCTCTGGTCAAGACAACTGCAAACAATCAGTGA 1431 0.434 MTVLHMIFKYEHTKKQICDVKLRLLIPLRRSCQSFDQVSPNPRYLIVHLSAKPCLSPHKKSNMWSAELCIGLAAGLVGICIVFAAAIIVIRLKNKREGNGIGKGRDLELQHLNLSVRTTCDKKVSFEGSPDTLKGKIIDTTPRRMLLETYTIEELRKATEDFSSTNQIQGPVFHGRLNGKNMAIKRANTETLTKIDFGLFNEALHHHPNILKLLGTCSTDDEDPESYLVFEFAENGSLRDWLHGGLAIKNQFIASCYCFLSWSQRLRICLDVAMGLQYMHHVMNPSYVHRNVKSRNIFLDEDFGAKLGNFGMAGCVENEPEDPLSHLTNPASWSLGYLAPEYVHQGTVSPSIDIFAYGVVLLEMLSGQTPISKPNEKGEGSVWLTEKIKSILKSENMDVLRDWMDSALGENYSFDAAITVAKLARACVDEDSSRRPCAGEVVEKLSRLVEEFPEEDHLFLSESSTKPLVKTTANNQ 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1881 476 SUPERFAMILY Protein kinase-like (PK-like) 141 445 IPR011009 -
Alju03g1881 476 Gene3D Transferase(Phosphotransferase) domain 1 233 464 - -
Alju03g1881 476 ProSiteProfiles Protein kinase domain profile. 95 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1881 476 FunFam PTI1-like tyrosine-protein kinase 3 233 458 - -
Alju03g1881 476 Gene3D Phosphorylase Kinase; domain 1 138 232 - -
Alju03g1881 476 Pfam Protein kinase domain 173 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1881 476 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 17 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1881 Alju-ChrAlju03 46685341 46687377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1881 56 473 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 41.741 9.04e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju03g1881 Pkinase 3.2e-32 CL0016