Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1876 ATGCTCCAAACTGGTTCAATGAGACATTTTCACCTTCTTCTGGTTCTTTCCTGGTTTTTGTCTATCCAAAGCAGCTATGAACTGCAGGCTGCTCAAACTCAAGCCCTATTACAGTTAAGGAAGTATCTGGAGAACCCTACCTCGTTGGAAGTTTGGGGAAATTATTACGGAGACTTCTGTAACATATCTCCATCGGCACGTATGAGCATTAAATGTGAGGACAATTCTGTTACTGAGCTTAAAATCATGGGAGATAAACCTGTGAACTTCAAAGAGTTTAATGGGTTGGCAATTCCTAATCAAACTTTGTCTGAGAGCTTCTCTGTTGATTCTTTTGTCACAACATTGGTCAGATTGTCCAGCTTGAGGGTTCTTAGCTTGGTCTCACTGGGGATTTGGGGGCCACTCCCTGATAAGATTCATCGACTATCTTTACTTGAAATTCTGGACTTGAGCTCAAATTTCTTATACGGTACAATCCCGCCAAAAATATCTACAATGGTAAAACTTCATACACTTAACATTAATGCCAATTATTTCAATAGCACTATGCCGGATTGGTTTGATTCATTATCTAATCTACGAGCTCTGAGTTTGAATAGCAACCGCTTGAAGGGTTCATTCCCCTCTTCACTGTGCAAAGTTAAAACGCTTACTGACATTTCCTTGTCTCACAATGACTTGTCTGGTAAATTGCCTGATCTGAGTACTCTCACTGGCTTACATGTGCTGAATTTAGGAGATAATCATTTAGACTCTGAACTACCGTTGATGCCCAAATCAGTAGTTACAGTTCTCCTCAGTAAAAATTCATTTTCTGGCAAGATACCCAAGCAGTTCGGTGAACTGGTTCAGCTTCAACATCTAGACCTTTCATCAAATAATCTCAGTGGGATTCCCCCTTCCCCATTGTTCTCTTTGCCTAACATGAGATTCATGAATTTAGCAAGCAATACCCTGAGCGGGTCCCTTCCAAACAAGCTAACTTGTGGAAGCAAACTTGGGTATGTGGATATTTCTAGTAACAAGCTACTTGGTGGACTTCCTTCTTGCTTGGCAGGCACGTCAGATAGAAGAGTCGTGAAATATGGTGGGAATTGCTTAACTATTGATTCTCAAGGATCTCAACACCAGACGCGAGGGTCTTACTGTAAACAGCCCAGTGTGAAGAAGTTCCAGGCAGTGAAAATAGGTGTGGCTGTGATCATTATTACTGGATTGGTGCTCATTCTTGTGCTTTTTGTGTTTGGTGTTTTCTTTTGTCGCAAGAGATGCCATTTGAGAAAAACACATGGGCAGCACGCGTTGCCAAAAACAGTAAGAAATAATTCTGCAACAGGGGTTTCCTCTGAACTCCTTGCAAGTGCCAGATTCATTTCTCATGCAGTGAAGATTGGGGTACAGGCTAATCCAGTCTGTCGAGTGTTTTCAATTGAAGAGCTGAAGGAGGCCACGAAAGATTTTCACGAGTCAACTTATATAGGAGAAGGCTCCATAGGGAAGTTGTACAAAGGTAAGCTGGAAAATGGGCCCTATGTAGCAATACGATCCTTGTCTCTCTCAAAGAAATGCTCAATTCAAAATCTTAAGGGTCGGTTGGATTTACTCTCAAAGCTTCACCATCCTAATTTGGTTAGCCTCTTGGGTCATTGTATAGATGGGGGTGGACAAGGTCATTCCAGTACCCTCAAACTTCACCTTGTGTATGAGTATATACCAAATGGCAATTATCGTGCACATCTGTCAGAATTTTCTCCAGAGAAGGCACTTAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCCAAGGCAGTGCATTTCTTACATACTGGGGTTATACCTGGCTGTTTTAGAAACCAATTAAAGACAAACAATATTTTGCTTGATGAGCACCACATTCCCAAACTAAGTGATTATGGGATGTCCCTAATCAGAGAAGAAATTGAAAAACTCGAGGCTAACGGAGAAAGCCCTATATCATGCCAAAAGACATCAATGGAGGATGACGTTTATAATTTTGGATTCATATTGTTTGAATCGCTTGTTGGAACCATAGCAAGTGAGAAAGGAGAAGAATATTTCCTGACTGAAAAGGCGTCCTTTGGGAGTCAAGATGGTCGAAGAAAGATAGTGGATCCAATGGTGTTGACCACCTGCTCTCAAGAGTCATTATCAATTGCAGTATCTATAACAACCAAATGCATATCGCCAGAACCATCATGCCGTCCCTCTTTTGAAGATGTCCTTTGGAACTTACAATACGCAGCTCAAGTCCAGGCCACTGCAGATGCAGATCAGAAATCTGATTCTACATGA 2319 0.4144 MLQTGSMRHFHLLLVLSWFLSIQSSYELQAAQTQALLQLRKYLENPTSLEVWGNYYGDFCNISPSARMSIKCEDNSVTELKIMGDKPVNFKEFNGLAIPNQTLSESFSVDSFVTTLVRLSSLRVLSLVSLGIWGPLPDKIHRLSLLEILDLSSNFLYGTIPPKISTMVKLHTLNINANYFNSTMPDWFDSLSNLRALSLNSNRLKGSFPSSLCKVKTLTDISLSHNDLSGKLPDLSTLTGLHVLNLGDNHLDSELPLMPKSVVTVLLSKNSFSGKIPKQFGELVQLQHLDLSSNNLSGIPPSPLFSLPNMRFMNLASNTLSGSLPNKLTCGSKLGYVDISSNKLLGGLPSCLAGTSDRRVVKYGGNCLTIDSQGSQHQTRGSYCKQPSVKKFQAVKIGVAVIIITGLVLILVLFVFGVFFCRKRCHLRKTHGQHALPKTVRNNSATGVSSELLASARFISHAVKIGVQANPVCRVFSIEELKEATKDFHESTYIGEGSIGKLYKGKLENGPYVAIRSLSLSKKCSIQNLKGRLDLLSKLHHPNLVSLLGHCIDGGGQGHSSTLKLHLVYEYIPNGNYRAHLSEFSPEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFRNQLKTNNILLDEHHIPKLSDYGMSLIREEIEKLEANGESPISCQKTSMEDDVYNFGFILFESLVGTIASEKGEEYFLTEKASFGSQDGRRKIVDPMVLTTCSQESLSIAVSITTKCISPEPSCRPSFEDVLWNLQYAAQVQATADADQKSDST 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1876 772 SMART LRR_typ_2 143 167 IPR003591 -
Alju03g1876 772 SMART LRR_typ_2 283 306 IPR003591 -
Alju03g1876 772 SMART LRR_typ_2 307 331 IPR003591 -
Alju03g1876 772 SMART LRR_typ_2 238 261 IPR003591 -
Alju03g1876 772 SMART LRR_typ_2 191 215 IPR003591 -
Alju03g1876 772 Gene3D Ribonuclease Inhibitor 29 261 IPR032675 -
Alju03g1876 772 Pfam Leucine rich repeat 263 320 IPR001611 GO:0005515
Alju03g1876 772 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Alju03g1876 772 ProSiteProfiles Leucine-rich repeat profile. 285 306 IPR001611 GO:0005515
Alju03g1876 772 ProSiteProfiles Leucine-rich repeat profile. 217 239 IPR001611 GO:0005515
Alju03g1876 772 ProSiteProfiles Protein kinase domain profile. 488 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1876 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 451 571 - -
Alju03g1876 772 Pfam Protein tyrosine and serine/threonine kinase 492 751 IPR001245 GO:0004672|GO:0006468
Alju03g1876 772 Gene3D Phosphorylase Kinase; domain 1 451 571 - -
Alju03g1876 772 Gene3D Ribonuclease Inhibitor 262 392 IPR032675 -
Alju03g1876 772 Gene3D Transferase(Phosphotransferase) domain 1 572 772 - -
Alju03g1876 772 SUPERFAMILY L domain-like 116 369 - -
Alju03g1876 772 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 33 352 - -
Alju03g1876 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 262 389 - -
Alju03g1876 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 29 260 - -
Alju03g1876 772 SUPERFAMILY Protein kinase-like (PK-like) 470 753 IPR011009 -
Alju03g1876 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 572 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1876 Alju-ChrAlju03 46664501 46668164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1876 13 768 Miscellaneous Gene Families AT5G14210 54.128 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Alju03g1876 PK_Tyr_Ser-Thr 4.8e-21 CL0016