Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1825 ATGTGTAATTTTAGCATGGTTAATGCAAGTTTAAAAAAAATGATAGAGACAAAAGGAAAGCTTAAATACGCGGAAGCTCCTCCTCTACCTCCTCCTCTCGCTCTCCCTCCCTCTCTCTCTGGAGTCTCTAATGTGATTTTGGTGTCATCTTCTAGCTCTTCGATAGTATGGCTAGTTTGCGAACATTCTGACATGACATCCTCATTCCGGGTTTTCTTGTTCTTCCTTCTTGGAATCAGTCTAATAGCAGTTACAGCTAGTAATCCATCAAAGAGCTGGCTTATTGATGTTGGAGGCTTTGCAAAGAAAGTGAAAAGTAGTTCTCTGCCCTCAGCTGAGCAAATCAAAGACTGTGGGGCATATCGTGAATGTCCAAATTGTCACTGGCATATTGATAATCGTGATGTTTTCCCCGAATGGCCTGGCTTTCCTGTTGGTGTAAAATTTGATCCTTCTGATATAGAACTCTTGGAACATTTAGCAGCAAAATGTGGCATTGGAAACGCAGAGCCACACATATTCATCCATGAGTTCATTCCAACGCTGGAGGGTGATGAGGGTATTTGCTACACTCATCCAGAAAATCTTCCAGGTGCTAAAAATGATGGGAATAGTGTTCATTTCTTTCATAGATCCATTAATGCCTATGCATGTGGTCAACGAAAGCGTCGAAAGATTCATCATGATAATGGTGCAACTGAGGAGCATGTGCGGTGGCACAAGACTGGTAAGACCAAATCTGTGGTGGAAGATGGCACACACAAAGGCTTTAAAAAGATCATGGTTCTTTATATAAGACCCGAGAAAGGTTCAAAGCCATATAAATCCAACTGGGTGATGCATCAATATCATCTGGGGACTGAAGAAGAGGAGAAGGAAGGTGAATATGTGGTCTCAAAGGTTTTTTATCAAAGGAAGCAGCTCGAGAAAAATGAGGAGAATCCATTACTTGAAGAATCAGATAATATGAAATTACGAACTAGTCCAAGAACCCCAAATCCAAATCCTCGCAATCCACCTCGACCAGGAAATTCTGCTGACTGTGATGATAATTTTGATGAGAAAGTACTTCTGCCATTTAACAAGGAGGCCGAGTCTCTCCCTGGAGAGCCAGGTGCCCTACCAACTGATGTCCAGGATGAGGGTGATACAAGTGGCCCTGCATGGTTGGCTGGTGAATCACAGGCTGACTTTGATGGCTTGGATGACTTATTATGCAAGGAGATATTTGATTCTTCTGCTCAATTAAATGATTATGGAATGAACGCCACTGTCAATGGCTTTGCCAGCAACTCAAACTTGTTAGCCAGAAATGACAATGCATCCTTTGGAATCTCTGACCTGGATAACCTGGAATTGGGTACTCCTCCAGATTTCCAACTTTCTAACTTGCAATTTTCTTCTCAAGACAGTGTATTTGATTGGATAGACAAGTTATAG 1440 0.4201 MCNFSMVNASLKKMIETKGKLKYAEAPPLPPPLALPPSLSGVSNVILVSSSSSSIVWLVCEHSDMTSSFRVFLFFLLGISLIAVTASNPSKSWLIDVGGFAKKVKSSSLPSAEQIKDCGAYRECPNCHWHIDNRDVFPEWPGFPVGVKFDPSDIELLEHLAAKCGIGNAEPHIFIHEFIPTLEGDEGICYTHPENLPGAKNDGNSVHFFHRSINAYACGQRKRRKIHHDNGATEEHVRWHKTGKTKSVVEDGTHKGFKKIMVLYIRPEKGSKPYKSNWVMHQYHLGTEEEEKEGEYVVSKVFYQRKQLEKNEENPLLEESDNMKLRTSPRTPNPNPRNPPRPGNSADCDDNFDEKVLLPFNKEAESLPGEPGALPTDVQDEGDTSGPAWLAGESQADFDGLDDLLCKEIFDSSAQLNDYGMNATVNGFASNSNLLARNDNASFGISDLDNLELGTPPDFQLSNLQFSSQDSVFDWIDKL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1825 479 ProSiteProfiles NAC domain profile. 143 304 IPR003441 GO:0003677|GO:0006355
Alju03g1825 479 Pfam No apical meristem (NAM) protein 144 285 IPR003441 GO:0003677|GO:0006355
Alju03g1825 479 SUPERFAMILY NAC domain 128 304 IPR036093 GO:0003677|GO:0006355
Alju03g1825 479 MobiDBLite consensus disorder prediction 312 351 - -
Alju03g1825 479 Gene3D NAC domain 152 309 IPR036093 GO:0003677|GO:0006355
Alju03g1825 479 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 91 385 IPR044799 GO:0003700
Alju03g1825 479 MobiDBLite consensus disorder prediction 364 383 - -
Alju03g1825 479 FunFam NAC domain-containing protein 8 152 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1825 Alju-ChrAlju03 46297550 46302206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1825 121 304 NAC Transcription Factor Family AT4G28500 54.839 1.26e-62 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju03g1825 NAM 1.2e-19 No_clan