Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1821 ATGGAAAATTACATGCTCTTTCTTTACTTATTTTTATCAGGTGCAGAAAGACGAACGAAAGTTGCTTTACTTTCTCGTTTCTTGATGGCGACTCCTGTCAATGGAGTTTCGCCTTTATCGGAGGCTCAGAATTCAGTTTCTGCAATAGATTCCAGTCCTTCTTCGACATTTTGGATTCCTCGTCTGTCTCGATCTTCTCTAAGAACGTCTAAAAATCTTGGGGTTTCTTCTACATCATATTTTACTGGTCACGGTGATGACTACGCAACGAAGCCCATCAACAACCATAAGAGTTGTGTAATTAATCGGAGGCATTCTTATCTGGAATCCGACAATGTGCAGCACGAAGAGTTACCAAATGCGTCAAAGCTGTATTACAACTATGGTGGAAAATCTGACCGTTTAAGCCTCCCTGAAAGTGGAGAAAGTTGTTTCGGGAAGAGAAGCTGTGCCATTGAACCATTTGATATTTCCACCTATTGTGATTCAAGTAGTAGCGTATTCGAATCTGGAGGTTCATCAAGAGGGGCTGATCCAATAATCAAGAGTTACTGTCATTCAGAGATTAGTTTTTGTCCAAGTCCTCAGAGTAGTTTCTATTCTTCCACTTTCTATTCTGAAGCCAAACAAAGTTTTTCTAATACTGAATTCAGTGAGGGTGTTAGTGTAAGTGATGTTACTGATACGAGCAGCAACAGTACTTTAAACAACTATTTGTATAGACCCCACAAGGCAAGTGATGTAAGATGGGAAGCAATTCAAGCGATCCGAGAACGTGATCGGCTCTTGGAAATGAGACATTTCAGTGTGTTGAAGACATTGGGACGTGGAGACATAGGAAAAGTTCATCTTGCTGAGTTGACTGGCACAGGAACCTATTTTGCCATGAAAATTATGAATAAAGAAGAGCTAGCAAGGCGCAAGAAGCTTCCGAGGCTTCAGACAGAAAGAGAGATATTGCAGTCTTTGGATCATCCATTTCTGCCCACATTATATGCACACTTTGAGACGGAGAGATTCTCTTGCTTAGTAATGGAGTTCTGCCCTGGTGGGGACCTGCATGCGCTCAGGCAAAGACAACCTGGGAAATATTTCTCAGAGGATGCTGCCAGGTTCTATGTGGCAGAGGTGCTACTTGCTTTGGAGTACTTGCACATGATGGGGATCATCTACCGAGACCTTAAACCTGAGAATGTGTTAGTGAGAGAAGATGGTCATATAATGCTGTCAGATTTCGACCTCTCTCTCAGATGCCCTGTGAGCCCAACTCTAGTAAGATCACCAAGCCCTTCCATGGACACAAAAAGCTCAAGATACCTCACTCCACCTGTTTGCATTCTTCCCAATTGTGTCATGCAGCCAGATTGCATCCAACCTGCATGTTTCACTTTCACACCTCGCAGACGATCTGCAAAGTCCAATAAGTTGAAAACCAGAATTGAAATGCATCATCACCATCACCATGTGACCCATCTTCCTGAGCTCATTGCAGAGCCAATAAATGCACGTTCAATGTCCTTTGTGGGCACTCATGAGTACTTAGCTCCAGAGATTATTAAAGGAGAAGGGCATGGTAGTGCTGTGGACTGGTGGACTTTTGGGGTATTCTTGTATGAGCTTGTGTTTGGTAGAACGCCGTTCAAAGGCTCAGCAACAAGAGCAACTCTGCTTAATGTAATGAGTCAACCATTGAGTTTCCCAGAATCACCAAGTGTCAGCTTTGCTGCTAGAGACCTGATAAGGGGTTTGCTTGTGAAAGAGCCACTTCATCGTCTTGCTTATAGACGTGGAGCTGCTGAGATCAAACAACATCCATTCTTTCGCAATGTTAACTGGGCACTCATTCGCTGCACTCAGCCTCCAGAGGTCCCCAGAAACGCCATGAAACACCTCTCACTTGAAAATCTGGCTGCCACAGTTTTGAAGCCTTCCTCTGTTAGATATTCAGATGTTGATTACTTTTGA 1965 0.4346 MENYMLFLYLFLSGAERRTKVALLSRFLMATPVNGVSPLSEAQNSVSAIDSSPSSTFWIPRLSRSSLRTSKNLGVSSTSYFTGHGDDYATKPINNHKSCVINRRHSYLESDNVQHEELPNASKLYYNYGGKSDRLSLPESGESCFGKRSCAIEPFDISTYCDSSSSVFESGGSSRGADPIIKSYCHSEISFCPSPQSSFYSSTFYSEAKQSFSNTEFSEGVSVSDVTDTSSNSTLNNYLYRPHKASDVRWEAIQAIRERDRLLEMRHFSVLKTLGRGDIGKVHLAELTGTGTYFAMKIMNKEELARRKKLPRLQTEREILQSLDHPFLPTLYAHFETERFSCLVMEFCPGGDLHALRQRQPGKYFSEDAARFYVAEVLLALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLSLRCPVSPTLVRSPSPSMDTKSSRYLTPPVCILPNCVMQPDCIQPACFTFTPRRRSAKSNKLKTRIEMHHHHHHVTHLPELIAEPINARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELVFGRTPFKGSATRATLLNVMSQPLSFPESPSVSFAARDLIRGLLVKEPLHRLAYRRGAAEIKQHPFFRNVNWALIRCTQPPEVPRNAMKHLSLENLAATVLKPSSVRYSDVDYF 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1821 654 CDD STKc_phototropin_like 266 625 - -
Alju03g1821 654 SMART serkin_6 268 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1821 654 Gene3D Phosphorylase Kinase; domain 1 267 351 - -
Alju03g1821 654 Gene3D Transferase(Phosphotransferase) domain 1 352 417 - -
Alju03g1821 654 Gene3D Transferase(Phosphotransferase) domain 1 502 625 - -
Alju03g1821 654 Pfam Protein kinase domain 269 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1821 654 Pfam Protein kinase domain 504 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1821 654 FunFam serine/threonine-protein kinase D6PK-like 502 625 - -
Alju03g1821 654 ProSiteProfiles Protein kinase domain profile. 268 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1821 654 FunFam Serine/Threonine Kinase 266 352 - -
Alju03g1821 654 SUPERFAMILY Protein kinase-like (PK-like) 246 631 IPR011009 -
Alju03g1821 654 FunFam serine/threonine-protein kinase D6PK-like 352 419 - -
Alju03g1821 654 PANTHER FLIPPASE KINASE 1-RELATED 182 629 - -
Alju03g1821 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1821 Alju-ChrAlju03 46256391 46260550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1821 180 654 AGC Kinase Gene Family AT3G27580 59.768 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju03g1821 Pkinase 2.1e-38 CL0016