Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1819 ATGATGATGGCGTCTTCATCAAGCTACAACTCTCCATGTGCGGCGTGCAAGTTTCTGAGAAGGAAGTGCATGCCGGACTGCATATTTGCGCCGTATTTTCCACCGGAAGAGCCACAAAAATTCGCCAACGTTCACAAGATATTCGGAGCAAGCAACGTGAGCAAGCTCCTGAACGAAGTGCTGCCACATCAGAGAGAAGATGCAGTGAACTCTCTGGCTTATGAAGCCGAGGCTCGTATCAAAGATCCAGTGTATGGCTGTGTTGGAGCCATCTCTGTGCTCCAGAGACAAGTCATTAGGCTCCAAAAGGAACTTGATGCCACTAATGCTGAAATGATTCGCTACACTACTACTTGCACTGAAATTAATCCCACTCATCATCATCATCATCATCATCACGATGCTGCAACTAGATTGTTGGGTAATAATGAAGGACCTCTTGTTGGAGGTTCGTCGTCGTCTCTTCTTGCTCAATCTCCTCCTCCTGCTACTTTTTACTATCCTTCTCCTTGGAATAATGATCTTTCTGGAGATGCCTTTCACCACATTCACAGAGGAGCAGATAACAGTAACATGTGA 579 0.4594 MMMASSSSYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNAEMIRYTTTCTEINPTHHHHHHHHDAATRLLGNNEGPLVGGSSSSLLAQSPPPATFYYPSPWNNDLSGDAFHHIHRGADNSNM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1819 192 Coils Coil 91 111 - -
Alju03g1819 192 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Alju03g1819 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 132 - -
Alju03g1819 192 Pfam Lateral organ boundaries (LOB) domain 12 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1819 Alju-ChrAlju03 46218780 46219358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1819 2 120 AS2 family AT5G63090 82.353 1.67e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju03g1819 LOB 5.9e-42 No_clan