Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g1796 | ATGATGGAACTCACCGATTCCGGCGACGAACTCAGGGACCACAAGCTGCCTCAAGATTCTCGCTCTGGACTTGGAATCGACCTCAATGAGATCCCCTCTTCCTCTTTTGCCGAAACCCTACCGGACTCCATTGACATCGTACGCGCGTACCACGAGAACCCGGCCCCTCCACCCGGCGGACCGGCGGGGATTCCCGGTGACGTCCGCGGCTCCACTTGTGGTGTCTGTGGTAAGCCCGAGGCGCGGGGTCATGTTGTGGTCTGCGACGGGTGCGAGCGCGGCTACCATTTGGGCTGCGCGGGAATGCGTGGGCGGCAGGCCGTAAACCTCGACGAATGGGTTTGTGGAGAGTGCGCGTCCAGCGGGGTCAAGAGTAAGCGTTGGCCTTTGGGTGTCAAGTCCAAGCATCTTTTGGACATCAATGCTTCGCCACCCAGCGATGCTGACGGCGAAGGTAGTGAAGAATTGCAGGATTTGAGAAAGCACACTCAGGGTCATAATTCTTTCAGTGCCAACTCATTTGGCGCCCCATTGACATATTCAAACTTCTTTAATGGTAATGCTATTGGCTTCCAAAAAGCATCTGGAGTTGTGACACATGCTGTTAGAGTGGGTTTTGAGGATGTATTGAATCATACGCAATCAGTGACTAGAAATTTTGAGGAGGTAGATATGGGTTTGCCTCCTGGAAGGCATAGGAATAGTAAAAATACAGCTAGTGGGAATCCAGGAGATGTAATTTTGCAAGCTCTTAGAGATTTTATATCTGAAAGGCATGGTGTTCTGGAGGAAGGCTGGAAAGTGGAGTTTAGACAAGCATTGGGCAACTCTGAGCTGTATGCTGTTTACTGCGCACCAGATGGAAAGATTTTTGATTCTGTGTTTGATGTAGCGTGTTATCTGGGGTTAATGCCTGGCTACAGCTCTTTGGAGTCTGAAATGAGAAACAATAGAGCTGTTTCTTCATTAGGTGGGTCTCATTTAACTAGGAAAAGAAAGTCAGCTAGACTCCCAGTCGCTAATGGCTTTGCTGAAAGAAAGGAAAGCTTTGCCAATAGTTGTTTTAAAGATCCTCCTTCGGACGCTGCAAGTGCAGAGTGTGTTAATGCATGTGGGAACATATCAGAAGCCACATTGAGTGGAAGGAAAGAGGACGATCACTCTGGCCCTCAGCAATCTGCCGATGGCCTTCCTTTACAGTTTGAAGATTTTTTTGTTCTTTCTTTGGGGAAGGTTGACGACAGAGCTTCATATTGTGATGCTAACATTATTTGGCCCGTAGGTTACAAATCTTGCTGGCATGATAGAATTACAGGCTCCATTTTTACGTGTGAAGTTCTGGATGGTGGTGATTCTGGACCTATATTTAGGGTCAGAAGGTGTTCCTGTTCTGTTTTTTCTATTCCAGTTGGGTCAACCATCCTCTCATTGTCAAACCCTTGTCAATTTGTGAGTCAAACCAATGAAGGTGAGGTAAAGATGAATGATAATATGGAATGTGATGATGATGAAAGTATCCAGATGATCCTGGACGACTCTTGCAATCCAACAGAAAATGATATATTGAATTGTCTTGAAAGTTGCTCTAGTGAAGCACGTGATAGCCATACATTAGATGTATCACGACCTGCAGCTGGTCCAGTTCAAGAGGAAACTCATAATTTGTCTGATGACTTGGGGTCAATTGGTGAGATTATGGTTGAAGAGTGTTCATCATCCTCAGCATGGAAGAATATTTCCCAAAAATTAGTGAATGCTTGCAGTGAAATATGCAAGCAGAAAGGGACTCTAAAGCTCTATTGTAAACATGCTGAAAATGAAACATGCGTATATAAATGGGATGTAAGGAATGGCAAAAATGGAACACACCCCACTTCATTTGCTAAATTTTGTGGGTCCCCTGCTCTTGGTATCCCTGCCATGGTTCAGGCAGATAATGATCTTGAAAGTTTGAATGAGGTCTTAGGAAAATGGTTGGAGCAGGATAGATTTGGGTTAGATGTTGAGTTTGTCCAAGAAGTGCTCGAGCTACTCCCTGGTGTTGAAGGATTCTCACGGTATGAATTTCTGAATACTAGAAGTAAAGGCTCTTCTTTGCTAACAGTTGGAAATGGGTTCTTAGTGGCTGATTGGAGAGACAGATCCCAACATCAGGAAGAAGCAGTGCAAGGTTTATATAGGAGACACAAGAAAGTAAAATTGGCCAAAGAATGTGCTAAGGAAGATCGCTGTCCACCTCCTGGGAAGCCACTATCCTCTAGGGTTCCTTTTGAACTTGTTGGTGATGTTTTTCAGGCTTGGGAGCTGTTACGCAGATTTCATGAAATTTTGGGCCTGAAGAAACCTTTGTCATTGGATGAGCTGGAGAAGGAACTTGTTAACCCATGGTTTAATGGATCAGTCGTTAGTGAAAAATGTGAGGGCGATGGCAGTGGTGGACCAATATTATCCCCAAACTGTGAAGCTGCTCCTTCAGTTTCTGCTGAAAGTCCCCATGCATTTATTCAAGTGGAAACTGAAGCCATGAAAGAGGCAGCTCAAGTTAAGCTTGCATCGTTCACTTACACCAGATGCTTTGGTGCATCTTTGACAAAGGCTCATAATTCATTGCTGGAGGTTTTAGTAGGTGAATTGCAATCCAAAGTGGCTGCCCTGGTGGATCCAAATTTTGATCCTGGAGAGCTGAGAACAAGACGTGGAAGAAGGAAAGACATAGATAGTACTGTTCCTGCCAGACGAGCCAAGCTCAATATGCTTCCTATTAATGAACTAACTTGGCCTGAATTGTCTCGTAGATACATATTAGCTTTCTTATCAATGGATGGTAACCTTGAGTCACCAGAGATTACTGCACGGGAAAGTGGCAAAGTATTTCGTTGCTTACAAGGTGATGGTGGTTTGCTGTGTGGCTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCATTGTTGCTTGCGGAGGCTACAAAGAAAATTTTTGGTTCTGTGAGCAGTGAAAGTGATGTGCTTACCTTTGAAGATGAGGAGTTAGATGCAAAGGATGCTTGTGAGAAAACTCCGGTGAATGATGGTAATATTCCAGAATGGGCACAGCTTCTGGAACCTGTAAGAAAACTACCTACAAATGTGGGAACCAGAATCAGAAAGTGTGTCTATGATGCCTTACTTAAGGATCCTCCAGAGTGGGCTAGGAAGATACTGCAACACTCAATTAGTAAGGAAGTGTACAAGGGCAATGCATCTGGACCTACAAAGAAAGCAGTTCTTTCCGTGTTGGCTGATGTATGTGGTGAAGCATCGCAACAGAAGCCCAGTAAAGCAAGGAGAAAAAAGACTGTAATATCTATTTCTGACATTATCATGAAACAATGTCGCATTGTATTACGCCGTGCTGCTGCTGCAGATGATTCCAAGGTTTTTTGCAATTTGCTGGGACAAAAATTAATAAATTCTTCTGATAATGATGATGAAGGGCTTCTTGGATCTCCAGCCATGGTGTCTCGTCCTCTTGACTTCAGGACCATTGACCTACGACTGGCTGCTGGGGTTTATGGTGGATCTCATGAGGCTTTTCTTGAGGATGTTCATGAGCTGTGGAACAATGTTCATATTGCTTTTGGGGATCAACCTGATTTAGTTGAGCTGGCTGATAAATTATCTGAGAATTTTGAATCGTTGTATGATAATGAGGTTTTAACTTATGTGCAAAGGTTTCGAGAGTATGCCAAATTGGGAAACTTAAGTGCAGAAATGAGAAAAGAACTGGAAAATTTTCTTGCATCAATTAGTGAAATTCCGAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTTTGCTATGTGATACCTGTGATGCTGAGTATCATACTTATTGCTTGAATCCTCCGCTAGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTTGACAATAGGCATGCTGTTCAAGATGTTTCACAATGTTCAAAACTTATTGGCAAACCTAGAAGTAAAAAATTCAAGGGGGAGGTTACTTCGCTTTACTTGGAGGCTCTTTCTCATCTACTATCTGTAATGGAAGAGAAAGAATACTGGGAGTACAGTGTGGGCGAGAGAACTATCCTTCTCAAGTTTTTATGTGACGAGTTGCTCAACACTTCCCTCATACGCCAGCACCTTGAGCAATGTGCTGAGTCATCTGCTGAATCACATCAGAAGTTGCGTGCACTCTCTGCAGAGTGGAAAAGCCTGAAAATTAAAGAAGAGATATTATCCACTAAAGCTGCAAAAATTGACACATGCTCAGTGGCAACTACTGGAGAAGAAGCCCTCAAGGAGGGGCTCCCTGGATCACTATCAAATCCTGGTAAATGCCTGGTTCAGCCACATAGTGCTAGTGGCAGTCCTAACAATTTTGGGGTATTTGCTGATGGTTTGCATTCGGAAGAAATAAACAGAGAGAAAAATGGGTTTAACAGTGTTGATAAGAGCGTCTCTACAACAAATTCAGAGACTGAAAACAGGAATCCCATAAATATGGAAGGACAGTTGAAGAATGTCTGTGCAGCTGTCGATGGCAGTCAGTTGCCTACAAATATGACTTTCTGTGTCGATTCTCAATGTAGTGACAAGTCTAGTAATCCTTTTTCAATGGCAAATATGCCTCAAGAAATTAACAGCTCTGGTGGAGCAGTTCATATCCAGGGTAACCGGCAGAAATGTGAGGGAGGAGATGCATCTCTTGATCTGCATGAACAAGGTGTTCCTTTTGATGTTCCTAAGTCTGCTGTAAATGAATCAGAACAATATCACCTCGAGCTCAATGCTATCAGACAGGATATCTCACTTCTTCAAGAGTCAATAACTAGTATTGAATCACAGCTGCTTAAGCTTTCTGTACGTCGGGAACTTTTGGGAATTGATTCGCTTGGTCGCTTCTACTGGGCTTCAGTAATGCCTGGTGGAAGTCCGTGTATACTTGCTGATTCAACTGCTCTGATGTTGCATGAGGGAAGAATGAACAATAGCAGAGACCCTGTAGACAAGATTTCTGCTACGAAGAATTGTACTCTATCTGGCAAGGATACCTATCAGATGTTAGGGCTGATGAAAGATTTATCTCCTTTAATGTCTCTACCAAGAAATACTGTAGGCTGTAATTTACCATGGGTTGTTTATCAAACTGATACTGAAATTGAAGAGCTCTTATGTTGGCTAAAGGATACTGACCCGAGAGAAAGAGAACTTAAAGATTCGATTATGAGTTGGCAAAAGTTAAGATTCCAAGAGCTTATTCATATTCAGAATGAAGATCAAGTTGAGCCCCAGGGACCTTTTCCTTTGCCACGGGATAGAGAGAGAATAGTGTCTGATTCTCTTGTTACAAAAGCAACCTCCTTGATAGAGAAGAAATATGGCCCATTTTTAGAGTTGGGTACCCTTGAGGCATTGAAGAAGCGGGGTAAAAAGGTAAGAACATCTAATGATGATAAGTTGTATAGGTGCCAATGCCTAGAACCCCTATGGCCTTCTAGGCAACACTGCATTTCTTGTCACAAAACCCTTTTGAATGATGTTGAACTGGAGGGACACAATGATTGCAAATGTAGTGCTGCTTTGCCTACCTCAGAGAAGAATAAAGATATTAGTGGATCTTCTAAAGGGAGAGGTAATGTGAAATTTGAGACCACCCATGGAAAAGTCAAAGGTAATGCAGAAACAGGTGGAACCTCAACTAGTGGAGGTTCTGAGCTTAGCTCGAGATTGATTAAGTTTTCGAATCAAGACTCAACATGTCCGTATAACTTTGAAGATGTCTGTTCCAAGTTTGTGACTGAAGACTCCAACAAGGAACTTATCAAAGAAATAGGTCTCATTGATTCAAATGGGATCCTATCCTTTGTTCTTTCTGTATCTCCTTATGTAAGTGATTCTACAGTTATGCTAATGTCAAACAAAAAGGATGAATATGTTGTTGGTGGGTCCAAGGCTTCTGAGGGGCAGATTCCTGAAGGAAATGAGGGAAGTGGCATGTGCCATGACCATATATCAGGAATTCCTATTCGAAGTTCCAATGTGTATGAAAACAATAAAGCAGGAAAATCCAGTAGATCAACTTTGGGATCTTCAGGACAAAGGGATGGAAAATCTTTATTTTCTGTTCCTGCTTCACAAGTGGGCACTGACAGTTGCTGTGTGGTACCTCAATCTTCATTGAGACCATTGGTTGGAAAAGTTTCCCATATTTTGAGGCTACTGAAGATTGGCCTACTTGATATGGATGCTGCACTCCCTGAAGTTGGTTTGAGGCCATCAAAAGCACAATTGGAAAGCAGACAGGCTTGGCGTGCATTTGTTAAATCTGCAAGGACTATATATGAGATGGTTCAGGCGACAATCACACTGGAGGACATGATTAAGACTGAGTACTTAAGAAATGACTGGTGGTACTGGTCATCACTCTCAGCCGCTGCCAAATCTTCTACTTTGTCATCCCTCGCCCTTCGAATATACACCCTTGATTCAGCCATTATGTACGAGAGAATGTCAAGTTCAAGTTTTACTGATTGCTTGGAACCTTCTGTGGTAACAGAACAGAAAGCACCAGCCACGTTGGATGCAGAAAAATCCAAAGCAATACGTAAGTCAAGCAGGAAAAGGAAGGAACCAGATGGTTAA | 6690 | 0.4317 | MMELTDSGDELRDHKLPQDSRSGLGIDLNEIPSSSFAETLPDSIDIVRAYHENPAPPPGGPAGIPGDVRGSTCGVCGKPEARGHVVVCDGCERGYHLGCAGMRGRQAVNLDEWVCGECASSGVKSKRWPLGVKSKHLLDINASPPSDADGEGSEELQDLRKHTQGHNSFSANSFGAPLTYSNFFNGNAIGFQKASGVVTHAVRVGFEDVLNHTQSVTRNFEEVDMGLPPGRHRNSKNTASGNPGDVILQALRDFISERHGVLEEGWKVEFRQALGNSELYAVYCAPDGKIFDSVFDVACYLGLMPGYSSLESEMRNNRAVSSLGGSHLTRKRKSARLPVANGFAERKESFANSCFKDPPSDAASAECVNACGNISEATLSGRKEDDHSGPQQSADGLPLQFEDFFVLSLGKVDDRASYCDANIIWPVGYKSCWHDRITGSIFTCEVLDGGDSGPIFRVRRCSCSVFSIPVGSTILSLSNPCQFVSQTNEGEVKMNDNMECDDDESIQMILDDSCNPTENDILNCLESCSSEARDSHTLDVSRPAAGPVQEETHNLSDDLGSIGEIMVEECSSSSAWKNISQKLVNACSEICKQKGTLKLYCKHAENETCVYKWDVRNGKNGTHPTSFAKFCGSPALGIPAMVQADNDLESLNEVLGKWLEQDRFGLDVEFVQEVLELLPGVEGFSRYEFLNTRSKGSSLLTVGNGFLVADWRDRSQHQEEAVQGLYRRHKKVKLAKECAKEDRCPPPGKPLSSRVPFELVGDVFQAWELLRRFHEILGLKKPLSLDELEKELVNPWFNGSVVSEKCEGDGSGGPILSPNCEAAPSVSAESPHAFIQVETEAMKEAAQVKLASFTYTRCFGASLTKAHNSLLEVLVGELQSKVAALVDPNFDPGELRTRRGRRKDIDSTVPARRAKLNMLPINELTWPELSRRYILAFLSMDGNLESPEITARESGKVFRCLQGDGGLLCGSLTGVAGMEADALLLAEATKKIFGSVSSESDVLTFEDEELDAKDACEKTPVNDGNIPEWAQLLEPVRKLPTNVGTRIRKCVYDALLKDPPEWARKILQHSISKEVYKGNASGPTKKAVLSVLADVCGEASQQKPSKARRKKTVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGQKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGVYGGSHEAFLEDVHELWNNVHIAFGDQPDLVELADKLSENFESLYDNEVLTYVQRFREYAKLGNLSAEMRKELENFLASISEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDNRHAVQDVSQCSKLIGKPRSKKFKGEVTSLYLEALSHLLSVMEEKEYWEYSVGERTILLKFLCDELLNTSLIRQHLEQCAESSAESHQKLRALSAEWKSLKIKEEILSTKAAKIDTCSVATTGEEALKEGLPGSLSNPGKCLVQPHSASGSPNNFGVFADGLHSEEINREKNGFNSVDKSVSTTNSETENRNPINMEGQLKNVCAAVDGSQLPTNMTFCVDSQCSDKSSNPFSMANMPQEINSSGGAVHIQGNRQKCEGGDASLDLHEQGVPFDVPKSAVNESEQYHLELNAIRQDISLLQESITSIESQLLKLSVRRELLGIDSLGRFYWASVMPGGSPCILADSTALMLHEGRMNNSRDPVDKISATKNCTLSGKDTYQMLGLMKDLSPLMSLPRNTVGCNLPWVVYQTDTEIEELLCWLKDTDPRERELKDSIMSWQKLRFQELIHIQNEDQVEPQGPFPLPRDRERIVSDSLVTKATSLIEKKYGPFLELGTLEALKKRGKKVRTSNDDKLYRCQCLEPLWPSRQHCISCHKTLLNDVELEGHNDCKCSAALPTSEKNKDISGSSKGRGNVKFETTHGKVKGNAETGGTSTSGGSELSSRLIKFSNQDSTCPYNFEDVCSKFVTEDSNKELIKEIGLIDSNGILSFVLSVSPYVSDSTVMLMSNKKDEYVVGGSKASEGQIPEGNEGSGMCHDHISGIPIRSSNVYENNKAGKSSRSTLGSSGQRDGKSLFSVPASQVGTDSCCVVPQSSLRPLVGKVSHILRLLKIGLLDMDAALPEVGLRPSKAQLESRQAWRAFVKSARTIYEMVQATITLEDMIKTEYLRNDWWYWSSLSAAAKSSTLSSLALRIYTLDSAIMYERMSSSSFTDCLEPSVVTEQKAPATLDAEKSKAIRKSSRKRKEPDG | 2229 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g1796 | 2229 | PANTHER | OS02G0192300 PROTEIN | 14 | 2225 | - | - | |
| Alju03g1796 | 2229 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Alju03g1796 | 2229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 138 | IPR013083 | - | |
| Alju03g1796 | 2229 | SMART | PHD_3 | 1274 | 1320 | IPR001965 | - | |
| Alju03g1796 | 2229 | SMART | PHD_3 | 72 | 119 | IPR001965 | - | |
| Alju03g1796 | 2229 | MobiDBLite | consensus disorder prediction | 1907 | 1921 | - | - | |
| Alju03g1796 | 2229 | Gene3D | - | 1116 | 1232 | IPR036427 | GO:0005515 | |
| Alju03g1796 | 2229 | SUPERFAMILY | FYVE/PHD zinc finger | 1260 | 1325 | IPR011011 | - | |
| Alju03g1796 | 2229 | SUPERFAMILY | Bromodomain | 1109 | 1229 | IPR036427 | GO:0005515 | |
| Alju03g1796 | 2229 | ProSiteProfiles | Zinc finger PHD-type profile. | 1272 | 1322 | IPR019787 | - | |
| Alju03g1796 | 2229 | ProSiteProfiles | FYR domain FYRN motif profile. | 396 | 449 | IPR003888 | GO:0005634 | |
| Alju03g1796 | 2229 | CDD | PHD_SF | 72 | 118 | - | - | |
| Alju03g1796 | 2229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1233 | 1333 | IPR013083 | - | |
| Alju03g1796 | 2229 | MobiDBLite | consensus disorder prediction | 2208 | 2229 | - | - | |
| Alju03g1796 | 2229 | SUPERFAMILY | DNA-binding domain | 254 | 307 | IPR016177 | GO:0003677 | |
| Alju03g1796 | 2229 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Alju03g1796 | 2229 | Pfam | Bromodomain | 1163 | 1217 | IPR001487 | GO:0005515 | |
| Alju03g1796 | 2229 | SUPERFAMILY | FYVE/PHD zinc finger | 71 | 130 | IPR011011 | - | |
| Alju03g1796 | 2229 | CDD | PHD1_Lid2p_like | 1274 | 1319 | - | - | |
| Alju03g1796 | 2229 | MobiDBLite | consensus disorder prediction | 1880 | 1896 | - | - | |
| Alju03g1796 | 2229 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 1354 | 1398 | IPR028942 | - | |
| Alju03g1796 | 2229 | MobiDBLite | consensus disorder prediction | 1880 | 1921 | - | - | |
| Alju03g1796 | 2229 | Pfam | Methyl-CpG binding domain | 253 | 304 | IPR001739 | GO:0003677 | |
| Alju03g1796 | 2229 | ProSiteProfiles | Zinc finger PHD-type profile. | 70 | 121 | IPR019787 | - | |
| Alju03g1796 | 2229 | Gene3D | - | 397 | 528 | - | - | |
| Alju03g1796 | 2229 | ProSitePatterns | Zinc finger PHD-type signature. | 1275 | 1319 | IPR019786 | - | |
| Alju03g1796 | 2229 | Pfam | PHD-finger | 73 | 120 | IPR019787 | - | |
| Alju03g1796 | 2229 | Pfam | PHD-finger | 1274 | 1320 | IPR019787 | - | |
| Alju03g1796 | 2229 | MobiDBLite | consensus disorder prediction | 223 | 242 | - | - | |
| Alju03g1796 | 2229 | MobiDBLite | consensus disorder prediction | 2205 | 2229 | - | - | |
| Alju03g1796 | 2229 | ProSitePatterns | Zinc finger PHD-type signature. | 73 | 118 | IPR019786 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g1796 | 2 | 2229 | C2H2 Transcription Factor Family | AT3G01460 | 45.024 | 0.0 | 1776 |
Transcription factors information