Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1791 ATGTCGAGGGACATGTATGAGTGGTTTTTTAACCACACCCATTTGAAGATGGCCTGGATACCTCAGCGAATCCAGGAAAAAGATGGGTATTTGAATTACCCATCACCGGTTTTGCCTTCATATCCATCTCCTTTCCCAGGTTCTCTCCACAATGAATCAATGCAGTCTTCCTCTTCACCTTCATCAGGTGGCAGTACTAGAATTAGTCCGGCTGTTCTTTTCGTTATAGTGATTCTGGCCTTGCTGTTTTTCGTATCTGGTCTGCTTCATCTGCTTGTTAGATTTCTCGCAAAGCACCCATCAGCTGGTCCATCGGCTCAATCCAATGGACACCAGGACATTACTGGCTCCGATGCTTTGCAGAGACAGCTGCAACAGCTTTTCCATCTCCATGACTCAGGGCTGGATCAAGCTTTTATTGATGCACTTCCTGTTTTCCAGTATAGAGAAATTGTGGGTCTGAAAGAACCATTTGACTGTGCTGTTTGTCTCTGTGAATTCTCTGAAAACGATAAGCTCAGGCTGCTTCCTACTTGCAGCCATGCCTTTCACATTGATTGCATAGACACCTGGCTTCTATCCAACTCGACATGTCCACTCTGTAGAGGAACTTTGTTCTCCCCAGGACTCTCTGTCGAAAACCCGATGTTTTATTTTGATGATATGAGGGAAGAAGATGGTTGCCCTTGCAATGGAGAAAGTGGGGTAACTCCCAGACAAAAAGCTGTGGAAATTGAAGAAGTTGTAGAGAAAGCAGTTCTTCCTGTAAGACTTGGTAAATTCAGAAGGCTTGATATGGATGCTGGGGATAATGTAGGAGGTGAAACCAGTAGCAGCAATTTGGATGCAAGAAGATGTTTCTCAATGGGGTCTTACCAGTATGTGCTTGGCAACTCAGACCTGCGAATTACCTTGAACGGTGACGGAAAGCTCTCCGAAGGAACAGAACAGACTGATAAGCTTTTAACGGAGGGTGATAAGGAAGCCAAAAAGATTACTAGTGTGAGTAAGGGTGAGAGCTATTCTGTTTCAAAAATCTGGCTGTGGTCCAACAAGGGAAAATTCTCAAGTTCTTCAAATGATCACATGGGCATGCCATCTTCTCTCAACACAGATTTACCATGGATGAGAACGGAAGGGACCTAA 1146 0.445 MSRDMYEWFFNHTHLKMAWIPQRIQEKDGYLNYPSPVLPSYPSPFPGSLHNESMQSSSSPSSGGSTRISPAVLFVIVILALLFFVSGLLHLLVRFLAKHPSAGPSAQSNGHQDITGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYREIVGLKEPFDCAVCLCEFSENDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTLFSPGLSVENPMFYFDDMREEDGCPCNGESGVTPRQKAVEIEEVVEKAVLPVRLGKFRRLDMDAGDNVGGETSSSNLDARRCFSMGSYQYVLGNSDLRITLNGDGKLSEGTEQTDKLLTEGDKEAKKITSVSKGESYSVSKIWLWSNKGKFSSSSNDHMGMPSSLNTDLPWMRTEGT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1791 381 Pfam Ring finger domain 159 202 IPR001841 -
Alju03g1791 381 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 207 IPR013083 -
Alju03g1791 381 CDD RING-H2_EL5-like 159 202 - -
Alju03g1791 381 SUPERFAMILY RING/U-box 139 208 - -
Alju03g1791 381 ProSiteProfiles Zinc finger RING-type profile. 160 202 IPR001841 -
Alju03g1791 381 FunFam RING-H2 finger protein ATL46 122 207 - -
Alju03g1791 381 SMART ring_2 160 201 IPR001841 -
Alju03g1791 381 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 64 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1791 Alju-ChrAlju03 45977925 45979070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1791 57 359 C3H Transcription Factor Family AT2G18650 42.433 7.97e-58 192