Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1790 ATGAAACAATTATTGTCCATGTGGATAATCTTCGTGGCATTCCTTCTCCTCCTGAACACTGGCAATTGTGTGGAGGACGAAGTCAGCAGCACACTGATAAACTTTCTTGCAAAACTCTCTAACAACAATGGCCGCCAGAACTCTAATTTGGCTTGGAAGCCAGGCTCTGATCCCTGCAGGGACTTGTGGCAAGGTGTGGTATGTGATGATAAAAATGCATCAGTACAGAAGCTGTTTCTTAACAGGTCCAGTTTAGCTGGAACTCTAGATGTTGCTATGCTTTGCAACTCGCAGCCCCTCTCTGCGTCCCTTACATCTCTTAACCTCGATGGCAACAACATAAGTGGAGGAATTGCAAATGAGGTTGGAAACTGCAAGCATCTCAGTCACTTGAATGTAAGTGGTAACCAACTTTCTGGGATCCTTCCTAGCTCACTTGCCATGTTGAGTAACTTTAAAGAATTTGACATCTCCCACAATAGGTTCTCAGGGAACTTGCCAAACATGTCCTCTTTATCTGGATTGAATGCCTTTTTGGCACAAAATAATCAGCTCACGGGGAAGATACCCCCTTGTAACTTTTCCAAATTTGACTACTTCAATGTATCCTTCAATGATTTAAGTGGTCCCATTCCAGATTTGCAAAACCATTTCTCTGCGGATAGTTTCTTGGGAAATCCTGAGCTTTGTGGAAACAACTTGACAAAAAGCTGTTCATCTTATCCTATATCTGATGCCAAACCACCTGATTCAGAAGAATCGAAGGGTCCTTCTAAAAGCCAGATTCTTATGTATTCAGGCTATGCTGTACTGTGTTTGGTTTTCATCATTTTTGTAGTTCTTGCGTTATGTAAAAGAAACAAGACAAGAAACAAGGTTGAAGCAGAAAAGGAGGCAACTGATGACAGTACCATTGACAAGCCTAGCTATGTTTCAAACGAGTACAAATCAAGCTTGAGCAGACCCGAGGTATCAGTCACTACTGAAAGTGGGATGGTTTCACAATCACTTGTAGTTGTTTCAAGGCCAAATGTAAATGATATTACATTGGAGGACTTGATGAGGTCCCCTGCTGAACTGATTGGCCGAGGAAAGTTTGGTAGTCTTTATAAAGTGATGCTGGACAATGGGATGATGGTGGTCGTTAAGAGGATTAACGACTTAAATATATCAAGCCATGACTTCAAAGAAAGGATGCAAATGGTAAGCCGAGTGCAGCACCAGTATGTACTCTCACCTCTTGCTTTCTATTGTTCCAAGCAAGAGAAACTTTTGGTCTATGAATATCAGGAGAATGGAAGTGTGTTCAAGCTTCTACATGGTTCCTCAAAAGACTTTGATTGGACCAGTAGACTTGGGATTGCAGCCACAGTTGCAGGGGCATTAACTTTCATGCATCAAGAGCTTGAAGAATGCGGGATCAGGATCGCACATGGTAACTTGAAATCCTCCAACATTTTGCTAAACAAGAATATGGACGCCTGCATAAGCGAGTATGGCGCTACGGTTATGGATGATCAAGAACTCAAAATTCAAAAGGGTTCTTCTTTTTCCAGTTCTTATGCTGCTGGTGCATCAGATGTCTTCAAGGGAGATGTTTATGGCTTTGGAGTGATTCTTCTGGAACTACTTACTGGGAAGTTAGTGAATAGCAATGGGATGGACTTGACTGAGTGGGTTGAGTCTGTTGTAAGGGAAGAATGGACGGGTGAAGTGTTTGACAGGTCACTGATATCAGAATATGCAAGTGAAGAGAGGATGGTGAACTTGCTTCAAGTGGCGATAAAATGTATTAATCATTCTCTAGAGGCTAGGCCAACTATGAACCAAGTTGCTCTCATGATCAACGCCATAAAAGAGGAAGAAGAAAAATCCTTGATTTATGAAGCATGA 1893 0.4194 MKQLLSMWIIFVAFLLLLNTGNCVEDEVSSTLINFLAKLSNNNGRQNSNLAWKPGSDPCRDLWQGVVCDDKNASVQKLFLNRSSLAGTLDVAMLCNSQPLSASLTSLNLDGNNISGGIANEVGNCKHLSHLNVSGNQLSGILPSSLAMLSNFKEFDISHNRFSGNLPNMSSLSGLNAFLAQNNQLTGKIPPCNFSKFDYFNVSFNDLSGPIPDLQNHFSADSFLGNPELCGNNLTKSCSSYPISDAKPPDSEESKGPSKSQILMYSGYAVLCLVFIIFVVLALCKRNKTRNKVEAEKEATDDSTIDKPSYVSNEYKSSLSRPEVSVTTESGMVSQSLVVVSRPNVNDITLEDLMRSPAELIGRGKFGSLYKVMLDNGMMVVVKRINDLNISSHDFKERMQMVSRVQHQYVLSPLAFYCSKQEKLLVYEYQENGSVFKLLHGSSKDFDWTSRLGIAATVAGALTFMHQELEECGIRIAHGNLKSSNILLNKNMDACISEYGATVMDDQELKIQKGSSFSSSYAAGASDVFKGDVYGFGVILLELLTGKLVNSNGMDLTEWVESVVREEWTGEVFDRSLISEYASEERMVNLLQVAIKCINHSLEARPTMNQVALMINAIKEEEEKSLIYEA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1790 630 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Alju03g1790 630 Gene3D Ribonuclease Inhibitor 22 238 IPR032675 -
Alju03g1790 630 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Alju03g1790 630 SUPERFAMILY Protein kinase-like (PK-like) 358 614 IPR011009 -
Alju03g1790 630 Pfam Protein kinase domain 359 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1790 630 ProSiteProfiles Protein kinase domain profile. 355 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1790 630 SUPERFAMILY L domain-like 61 236 - -
Alju03g1790 630 Gene3D Phosphorylase Kinase; domain 1 324 429 - -
Alju03g1790 630 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 95 189 - -
Alju03g1790 630 PANTHER OS05G0588300 PROTEIN 9 620 - -
Alju03g1790 630 Gene3D Transferase(Phosphotransferase) domain 1 431 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1790 Alju-ChrAlju03 45972634 45974629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1790 29 619 Receptor kinase-like Gene Family AT1G68400 33.861 6.30e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju03g1790 Pkinase 3.5e-22 CL0016