LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g1788	ATGCATTTTTACGAGGACGTTGTTCCACTATGTGCTCTGATTGCTACAGAGTGCATTAACGTTGGAGCTAGCACTCTGTTTAATAGTCTGATTCTAAATGGCGTCAATTACTACGTCTTCACTGTCTATGCTTCTGCAATTTCCACTCTTGTTCTTCTTCTTCCTCTCCCCTTCATTCTCCGCCGTTCAAATGGGCTTCCTCCATTCAAGTCGACTCTGCTTTTTAAAATTTTCCTCCTGGGACTCATCAGCCTTGGAACTCGGCTTTGTGGAACCAAAGCCATTGAATACAGTTCACCTACTCTGGCTGCTGCCATGAGCAACCTCATTCCTGCTTTTACCTTCATACTCGCCATCTTCTTCAGGTTGGAAAAGGCAGAGTTAAGAAGTTTAAGCACTATGGCCAAAATCATAGGTACAGTAGTATCAATTTCTGGTGCCCTCGTAGTTGTTCTCTTCAGGGGTCCTACACTAAAGTCAGCATCTTCTCCATCAACACTGGATTCTTCATCAGCTCAAAAGAAATGGGTTCTTGGTGGCTTCCTACTTCTTGTTGAGTATCTTGTAGTTCCATTCTGGTTCATTCTCCAGACCCAAGTTATAAAAGAATATCCAGCAAAGCTGATAGTGGTGTTTTTACTTTTTACTCAACCTGTGTGGGACCATTATATCTGCACCAGCTTAAGCTGTCTGATTGAAATATGGGGTCTCCATCTGAAAGGCCCAGTGTATGTGTCAATGTTCAGGCCCCTCTCCATCGCCATTGCTGCTGCTATGGGTGTCATATTCCTCGGAGAGGCTCTGCATCTAGGCAGGCATGAAAACCAGAATCAGGTAGAAGTTAAAAAGAATATTCCTGTATGCTTCGTTCATCATGTGACACGTGTTGAAATGTTTTGCAGTGTTATTGGAGCAGCAATTCTGTCCGTTGGTTTTTACGCTGTGATATGGGGGAATACTAAAGAGGAAGAAGAGTTGAAGAAGAAGTGGGAGTGTGATAGCTCACAGTCACAAACCCAACCGAATAGCAGCAGGACTCCTTTGTTGCAGAGCGAGGAAGATAATAACAAAGAATGGAATGGCATATAA	1089	0.4343	MHFYEDVVPLCALIATECINVGASTLFNSLILNGVNYYVFTVYASAISTLVLLLPLPFILRRSNGLPPFKSTLLFKIFLLGLISLGTRLCGTKAIEYSSPTLAAAMSNLIPAFTFILAIFFRLEKAELRSLSTMAKIIGTVVSISGALVVVLFRGPTLKSASSPSTLDSSSAQKKWVLGGFLLLVEYLVVPFWFILQTQVIKEYPAKLIVVFLLFTQPVWDHYICTSLSCLIEIWGLHLKGPVYVSMFRPLSIAIAAAMGVIFLGEALHLGRHENQNQVEVKKNIPVCFVHHVTRVEMFCSVIGAAILSVGFYAVIWGNTKEEEELKKKWECDSSQSQTQPNSSRTPLLQSEEDNNKEWNGI	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g1788	362	PANTHER	WAT1-RELATED PROTEIN	224	334	IPR030184	GO:0016020\|GO:0022857
	Alju03g1788	362	Pfam	EamA-like transporter family	13	151	IPR000620	GO:0016020
	Alju03g1788	362	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	154	-	-
	Alju03g1788	362	MobiDBLite	consensus disorder prediction	328	362	-	-
	Alju03g1788	362	MobiDBLite	consensus disorder prediction	333	362	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g1788	Alju-ChrAlju03	45965355	45968754	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g1788	2	355	Nodulin-like Gene Family	AT5G40240	43.257	1.06e-93	282