Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1783 ATGCTATGTCCAGAAGATAACATTGTTTTTCCTGCCAAACTTTTCTTATCTGCAGCTGATGCATATAACCATACTGATTCTGAATTTCTCAGATTAGAAAACACTCAAAACAGAGATGCTGGATCAACTGCTATTCTGGTTGGTGACCATTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAGTGGTCCGATTTCGTCAATTCTTTTTTTCCCCTCCTGGTGTTCTGAGATCTCAGTTTTGGAACTCGGGGTTTCGCTGCTTTTGAGTTCTCCAATTTCTTTGTTCTACCTCAATTTTAAGGCAATGTCGCAGGGCTATGCTATTGAGCTTTACTTCGACCCTGCGCTTGAAAACCAGGTCTTGAAGGCCTGGAATGTACTGGCTCGCCGACAAATCAGTACCCAACTCATCGAAATTGAGTCGCGCCCCCACATCACTCTTTTCTCAAGCCAATTCACTGATCCTATCAAGCTTGAATCCATTATCAGGAATTTCGCAGCCAAGCTTGAATCTCTGCCTCTATCTTTCTCTTCCATTGGGACCCTGCCGAATGACAGCAATGTCCTTTTTCTTGCACTCACGCCCTCAATCTCGCTACTTCAGTTCCAATCGCAATTGTGTGATGCATTGAAGAAAGAAGGCGTCGAGATAGGTGAGGAATATCGCCAGGATTCTTGGATTCCTTATTGTTCGGTTGCGCAGGAATTGCCAAAATCTAGGATGGCTGAGGCATTCTGTGTCTTGCGAGACTTAAAATTGCCAGTAACTGGGTATGCTACGGATATCGGACTGGTTGAGTTCTCGCCTGTTCGTGAGCTCTTCTCATATGTGCTGGGAAACACACTAGAAACTTAA 876 0.4475 MLCPEDNIVFPAKLFLSAADAYNHTDSEFLRLENTQNRDAGSTAILVGDHLLVANVGDSRAVICRGGSGPISSILFFPSWCSEISVLELGVSLLLSSPISLFYLNFKAMSQGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSQFTDPIKLESIIRNFAAKLESLPLSFSSIGTLPNDSNVLFLALTPSISLLQFQSQLCDALKKEGVEIGEEYRQDSWIPYCSVAQELPKSRMAEAFCVLRDLKLPVTGYATDIGLVEFSPVRELFSYVLGNTLET 291
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1783 291 Pfam 2'-5' RNA ligase superfamily 149 272 - -
Alju03g1783 291 SUPERFAMILY PP2C-like 18 68 IPR036457 -
Alju03g1783 291 SUPERFAMILY LigT-like 112 273 IPR009097 -
Alju03g1783 291 PANTHER - 108 289 - -
Alju03g1783 291 Pfam Protein phosphatase 2C 24 68 IPR001932 -
Alju03g1783 291 Gene3D Cyclic phosphodiesterase 113 285 - -
Alju03g1783 291 Gene3D - 8 85 IPR036457 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju03g1783 Alju-ChrAlju03 45905878 45911883 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1783 109 291 Calmodulin-binding Proteins AT5G40190 72.678 3.06e-90 264