Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1776 ATGAACGGCCTTCCTTCCTCTCATCCGCCAAATTTCCACTCCGTCGTTGAAGCAATCAACCTTCCTTCCATGGCGGGTGGAACCGAAGCCTTCCCACATCTGGGATCACACTGCCATCACGTTCATTGCCATCAACTCGATTTTCTTCCTTTTACATGCGACGCTTGCTCCCAGGTTTTCTGTCTGCAACATAGATCCTACGACTCCCACAATTGCCCCAAATCAGACCATAACAGCAGGAAGGTTGTGGTTTGCCCCACATGTTCGATGTCCATCGAGACCACCGGCTATGATGAAGACCACGAGAAGGCTATATTGGACAAGCATCACAGATCTGGAATGTGTGACCCCACCAAGAAGAAAAAGCCCACTTATTGCCCTGTAAAGAGGTGCAAAGAGGTTCTCACCTTTTCTAATACCTCCATCTGTAAAACTTGCCTCCTTAAGGTCTGCCTCAACCATCGCTTTCCTGCCGACCACGCCTGTAAAGGACCAGCCTCATCGCCTGAAGCTAATCATACGAATGGGAGTTGGATGGATCGGTTCTTGGCTGCTCTGTCTTGGAGGAATCCAAAGCCATGTTCCAAAAGCAGGGGACACAGCACCTCATCATCTCCTCCTACTCCATCTGTTAAAAGCTTCTGA 645 0.4946 MNGLPSSHPPNFHSVVEAINLPSMAGGTEAFPHLGSHCHHVHCHQLDFLPFTCDACSQVFCLQHRSYDSHNCPKSDHNSRKVVVCPTCSMSIETTGYDEDHEKAILDKHHRSGMCDPTKKKKPTYCPVKRCKEVLTFSNTSICKTCLLKVCLNHRFPADHACKGPASSPEANHTNGSWMDRFLAALSWRNPKPCSKSRGHSTSSSPPTPSVKSF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1776 214 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 30 199 - -
Alju03g1776 214 MobiDBLite consensus disorder prediction 194 214 - -
Alju03g1776 214 SUPERFAMILY AN1-like Zinc finger 29 80 IPR035896 -
Alju03g1776 214 SUPERFAMILY AN1-like Zinc finger 108 170 IPR035896 -
Alju03g1776 214 Pfam AN1-like Zinc finger 126 165 IPR000058 GO:0008270
Alju03g1776 214 Pfam AN1-like Zinc finger 38 75 IPR000058 GO:0008270
Alju03g1776 214 ProSiteProfiles Zinc finger AN1-type profile. 120 170 IPR000058 GO:0008270
Alju03g1776 214 SMART AN1_Zf_4 38 77 IPR000058 GO:0008270
Alju03g1776 214 SMART AN1_Zf_4 126 167 IPR000058 GO:0008270
Alju03g1776 214 Gene3D - 103 179 IPR035896 -
Alju03g1776 214 ProSiteProfiles Zinc finger AN1-type profile. 32 80 IPR000058 GO:0008270
Alju03g1776 214 MobiDBLite consensus disorder prediction 190 214 - -
Alju03g1776 214 Gene3D - 23 83 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1776 Alju-ChrAlju03 45861678 45862400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1776 25 194 C2H2 Transcription Factor Family AT3G28210 61.765 2.93e-72 216