Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1769 ATGACTAGAGACACAAGCTTGGATGGGGAAATTATGACATCTGATACAACAGGATCATCAGCAAGTCATCCACCAACTGAAGAACCTGAAAAAATCCAAACAAGCACAGATAGGCAGCGACAAGATTTAAAGAAGAGCAAGGCCAAAGAAGAAAGCCATAAAACAGTTCCATTCTACAAGCTTTTCTCATATGCAGATACTTTCGATCGTCTTCTCATGTTTATTGGGACAATAGCAGCTGTTGCTAATGGAATGACAATACCTCTATTGATGATAATTTTTGGAGATGTCATTGATGCTTTTGGAGGAACCAGTGACGCCAAAGAAATGGTTCATAATGTCTCCAAGGCCTCTCTTGACTTTGTATACCTGGCTATGGGTACCTTTTTAGCTTCATTTTTGCAGGTGACTTGCTGGATGGTCACTGGAGAGAGACAGTCTGCAAGGGTAAGAAGCTTATACCTTGAGGCAATTCTGAGACAAGAAGTAAGCTTCTTTGATAGGGAAACCAATAGTGGAGAGGTTATTACAAGGATGTCAGGTGACACAGTTCTTATTCAAGATGCCATGGGAGAGAAAGTAGGAAAGTTCATACAGCATGTGGCAACATTTGTGGGAGGTGTGGTCATATCATTTTTCAAGGGCTGGCTTCTCACCCTTGTCATGCTAACTTTTCTTCCACTTTTTCTCCTCTCTGGTGCCTTGATGAGCTTCGTCGCTGCAAAAATGGCATCTCGCGGACAAGCAGCCTATTCCACAGCAGCAAATGTGGTGGAACAGACAATCAGTTCCATTCGAACTGTTGCATCATTCACAGGGGAGAAGCAAGCTATAAGCCAGTATAATAAATCTTTAATAAAAGCTTACCATGCTGGTGTGGTAGAGGGAGCAGCTTCTGGTTGTGGCTTCGGTTCAGCTCGTATGTTTATATTCTCCAGTTATGCTTTGGCCGCATGGTATGGAGGGAAGATGGTACTAGAGAAAGGATATACAGGAGGACAAGTCATGAGTATCTTTTTTGCCATATCTACTTGCTCCCTGTCTCTAGGGCACTCATCTCCAAGTCTGATTGCATTTGCTGCGGGACAAGCTGCAGCTTTTAAAATGTTTGAAACAATCAAGAGGAAACCAGAAATTGATGCTTATGACACTTCTGGTCAGAAGTTGGATGACCTTAATGGAGATATAGAACTAAAGGAGGTTTGCTTTAGTTATCCTACAAGACCGACTGAATTAATATTCAATGGATTTTCTCTATCAATACCAAGTGGCACTACTACTGCCTTGGTAGGGCAAAGTGGGAGTGGGAAATCAACTGTTATCAGTTTGATAGAAAGGTTTTATGATCCACAATGTGGTGAAGTTCTTATAGACAATATCAATCTCAGAGAGCTCAATTTAAAATGGATTAGAGGGAAAATAGGCCTTGTCAGCCAGGAACCAATTCTCTTTGCTTGTAGCATTAAAGAGAATATTGCTTATGGCAGAGATGGCGCAACCGATGAAGAGATCAGAGTTGCAGCAGAACTTGCTAATGCTACTAAATTCATTGATAAATTTCCTCAGGGACTAGACACAATGGTAGGCGAGCATGGAACTCAGCTCTCTGGGGGTCAAAAGCAGAGAATTGCAATAGCAAGAGCAATCTTGAAAGACCCAAAAATCTTACTTCTTGATGAAGCTACCAGTGCCTTGGATGCTGAATCCGAGAGAGTAGTGCAGGAGGCATTGGACAGAATTATGATAAGCAGGACAACCGTAATTGTAGCCCACCGTTTAAGTACTGTAAGGAACGCAGATATAATAGCCGTTATTCACCAAGGAAAGGTAGTGGAAAAAGGCTCACATGAAGAGCTCACAGAGGATCCAGATGGAGCCTATAGCCAGCTCATTAGATTGCAAGAAGCTAAAAGAGAACAAGAACTTGCAAATTACAAGGATAAGCCTGAAAGCTTTCAGGACTCTGGACCACAATCAAGTCAAAGGTTTTCTTTCCTTCGGTCAACAAGCCATGGATCATCTGGAAAAGGAAACAGCGGCCGTCACTCTTTCTCAAGTCTCACTTCTGCAGCAGCAGGAGATTCTGATGAATCACATAACCCTACCAAAGTCTCACTTCTCCACCTTGCTCATCTTAACAAGCCTGAATTCCCAGTGTTACTATTGGGTACTTTGGCTGCAGCACTAAATGGAGCAGTATTACCTATTTTGGGGCTCCTTTTATCTGGCATGATACACACTTTCTCTGAGCCTGCAGATAAACTCCGTAAAGATTCAAAATTCTGGGCTTGTGTGTTTATTGCACTTGCTGTGGCAGCCTTCTTAGTGAATTCTATAAGGTCCTACTTTTTTGGTGTGGCTGGTTGTAAGTTGATAAAAAGGATCCGTCTATTGTGTTTTGAGAAAATAATTCACATGGAAATAGGTTGGTTTGACAAAGCTGAGAATTCAAGTGGAGCACTTGGAGCAAGACTTGCTACTGATGCTGCTTCCATTCGAGCCGTGGTTGGGGATGCACTAGGCTTACTGATTCAAGACATGTCCACTGCAATCTCTGCCTTAGTAATTGGCTTTGAGACAAGCTGGAGTCTTTCATTAATCATTGTTGCTATGTTACCTTTACTGGTAGTGGTAAATTCTCAGGTGCATACTAAATCCATGCGAGGATTCAGCGCAGATGCAAAGAAACAATATGAGGAAGCAAGTCAAGTTGCAAATGATGCAGTAGGGAGTATCAGGACAGTGGCTTCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACCATAAGAAATGTGAAGGACCAATAAAAGCAGGTACAAGGCAAGGATTAATCAGTGGAACTGGCTTAGGTGTATCTTTCCTTGTCTTGTATTCTGTCTATGGATGCAGCTTTTATGCCGGTGCTCGACTTGTTCAAGATGGCAAAATATCAATCTCACATGTTTTTCGTGTCTTCTTTGTTCTCACTATGGCAGCTGTAGCACTATCTCAGTCTGGTTTAATGGCCCCAAGTGCAAGCAGAGCAACAGCTTCTATTGCTTCCATATTTGATATTCTTGATCAGAAATCAAAAATAGATCCTAGTGATGTCTCTGGATTGACTTTGCAAGATTTGAACGGAGAAGTTGAGTTTCGTCATGTTGCTTTCAAGTATCCCACCAGGCCTAATGTTCAAATATTTAGAGATCTTTGCTTGACCATTCGTCCAGGAAAGACTGTTGCATTAGTGGGAGAAAGTGGAAGTGGAAAGTCAACTGTGATCTCGTTGCTGCAAAGATTCTATGACCCAAACTCAGGTCACATAACATTAGATGGAATGGAAATTCAAAAGCTACAGATCAAATGGTTAAGACAACAAATGGGTTTAGTAAGCCAGGAGCCTATATTGTTTAATGACACCATCCGAGCTAATATTGCATATGGAAAAGAAGGAGATGCAACAGAAGCAGAAATTACAGCTGCTGCAGAACTAGCAAATGCTCACAAGTTCATTAGCAGCTTGTATCAGGGGTATGACACAATTGTGGGGGAGCGAGGAGTTCAATTATCTGGGGGACAAAAGCAAAGAGTGGCAATTGCAAGAGCCATAGTGAAGAAGCCTAAGATATTACTATTAGATGAAGCCACTAGTGCTCTTGATGCTGAATCTGAAAAAGTGGTTCAAGATGCACTAGATCGTGTCATAGTGGATAGAACCACAATTCTTGTGGCTCATAGGTTATCCACAGTTAAGAATGCTGATTTAATTGCAGTGGTTCAAAATGGGGTCATTGCAGAGAAGGGAAACCATAAAACTTTGCTCAGAAAGGGTGGAGCCTATGCTGCTTTACTTGCACTGCACAAAATAAGATTTGGATTGGTCCCAAAACGGACGGTGCGGATCACACCTGTGAACGAACCCATTATTAGAATTAAAGTCTTTGTTCCTTGGCGAAGCAAGTCTTCTCTTAGTAAGGACTTGCTCTTCCTTAACCTTCTCCTCTGA 3987 0.4196 MTRDTSLDGEIMTSDTTGSSASHPPTEEPEKIQTSTDRQRQDLKKSKAKEESHKTVPFYKLFSYADTFDRLLMFIGTIAAVANGMTIPLLMIIFGDVIDAFGGTSDAKEMVHNVSKASLDFVYLAMGTFLASFLQVTCWMVTGERQSARVRSLYLEAILRQEVSFFDRETNSGEVITRMSGDTVLIQDAMGEKVGKFIQHVATFVGGVVISFFKGWLLTLVMLTFLPLFLLSGALMSFVAAKMASRGQAAYSTAANVVEQTISSIRTVASFTGEKQAISQYNKSLIKAYHAGVVEGAASGCGFGSARMFIFSSYALAAWYGGKMVLEKGYTGGQVMSIFFAISTCSLSLGHSSPSLIAFAAGQAAAFKMFETIKRKPEIDAYDTSGQKLDDLNGDIELKEVCFSYPTRPTELIFNGFSLSIPSGTTTALVGQSGSGKSTVISLIERFYDPQCGEVLIDNINLRELNLKWIRGKIGLVSQEPILFACSIKENIAYGRDGATDEEIRVAAELANATKFIDKFPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVVQEALDRIMISRTTVIVAHRLSTVRNADIIAVIHQGKVVEKGSHEELTEDPDGAYSQLIRLQEAKREQELANYKDKPESFQDSGPQSSQRFSFLRSTSHGSSGKGNSGRHSFSSLTSAAAGDSDESHNPTKVSLLHLAHLNKPEFPVLLLGTLAAALNGAVLPILGLLLSGMIHTFSEPADKLRKDSKFWACVFIALAVAAFLVNSIRSYFFGVAGCKLIKRIRLLCFEKIIHMEIGWFDKAENSSGALGARLATDAASIRAVVGDALGLLIQDMSTAISALVIGFETSWSLSLIIVAMLPLLVVVNSQVHTKSMRGFSADAKKQYEEASQVANDAVGSIRTVASFCAEEKVMELYHKKCEGPIKAGTRQGLISGTGLGVSFLVLYSVYGCSFYAGARLVQDGKISISHVFRVFFVLTMAAVALSQSGLMAPSASRATASIASIFDILDQKSKIDPSDVSGLTLQDLNGEVEFRHVAFKYPTRPNVQIFRDLCLTIRPGKTVALVGESGSGKSTVISLLQRFYDPNSGHITLDGMEIQKLQIKWLRQQMGLVSQEPILFNDTIRANIAYGKEGDATEAEITAAAELANAHKFISSLYQGYDTIVGERGVQLSGGQKQRVAIARAIVKKPKILLLDEATSALDAESEKVVQDALDRVIVDRTTILVAHRLSTVKNADLIAVVQNGVIAEKGNHKTLLRKGGAYAALLALHKIRFGLVPKRTVRITPVNEPIIRIKVFVPWRSKSSLSKDLLFLNLLL 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1769 1328 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 396 632 IPR003439 GO:0005524
Alju03g1769 1328 MobiDBLite consensus disorder prediction 1 49 - -
Alju03g1769 1328 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 74 361 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1769 1328 MobiDBLite consensus disorder prediction 1 29 - -
Alju03g1769 1328 MobiDBLite consensus disorder prediction 651 699 - -
Alju03g1769 1328 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1043 1280 IPR003439 GO:0005524
Alju03g1769 1328 MobiDBLite consensus disorder prediction 30 49 - -
Alju03g1769 1328 SUPERFAMILY ABC transporter transmembrane region 709 1027 IPR036640 GO:0005524|GO:0016020
Alju03g1769 1328 ProSitePatterns ABC transporters family signature. 535 549 IPR017871 GO:0005524|GO:0016887
Alju03g1769 1328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 634 IPR027417 -
Alju03g1769 1328 SUPERFAMILY ABC transporter transmembrane region 54 380 IPR036640 GO:0005524|GO:0016020
Alju03g1769 1328 FunFam ABC transporter B family member 9 60 393 - -
Alju03g1769 1328 ProSitePatterns ABC transporters family signature. 1183 1197 IPR017871 GO:0005524|GO:0016887
Alju03g1769 1328 CDD ABC_MTABC3_MDL1_MDL2 396 634 - -
Alju03g1769 1328 Pfam ABC transporter 1063 1211 IPR003439 GO:0005524
Alju03g1769 1328 Gene3D ABC transporter type 1, transmembrane domain 120 953 IPR036640 GO:0005524|GO:0016020
Alju03g1769 1328 MobiDBLite consensus disorder prediction 642 699 - -
Alju03g1769 1328 CDD ABC_6TM_Pgp_ABCB1_D1_like 73 357 - -
Alju03g1769 1328 Pfam ABC transporter 415 563 IPR003439 GO:0005524
Alju03g1769 1328 CDD ABC_MTABC3_MDL1_MDL2 1043 1277 - -
Alju03g1769 1328 CDD ABC_6TM_Pgp_ABCB1_D2_like 712 1026 - -
Alju03g1769 1328 FunFam ABC transporter B family member 1 386 635 - -
Alju03g1769 1328 FunFam ABC transporter B family member 1 700 1009 - -
Alju03g1769 1328 FunFam ABC transporter B family member 1 1033 1282 - -
Alju03g1769 1328 Gene3D - 394 678 IPR027417 -
Alju03g1769 1328 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 721 1008 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1769 1328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1034 1279 IPR027417 -
Alju03g1769 1328 Gene3D ABC transporter type 1, transmembrane domain 19 101 IPR036640 GO:0005524|GO:0016020
Alju03g1769 1328 SMART AAA_5 423 595 IPR003593 GO:0016887
Alju03g1769 1328 SMART AAA_5 1070 1263 IPR003593 GO:0016887
Alju03g1769 1328 Pfam ABC transporter transmembrane region 720 993 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1769 1328 Pfam ABC transporter transmembrane region 73 344 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1769 1328 Gene3D - 1034 1284 IPR027417 -
Alju03g1769 1328 PANTHER ABC TRANSPORTER B FAMILY 35 637 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1769 Alju-ChrAlju03 45802002 45807621 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1769 74 640 Calmodulin-binding Proteins AT2G36910 38.596 6.07e-114 386