Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1749 ATGGATATGACGACGGTATGGGCTCAATTAGGCTCAGTGACGGCCACCGTCATGTTCCTCTACGCCATGTTTGACAAGTTCTTCCCTCCGCCGCTTCGCGACCATCTCCGATCTTACACCAACAAACTCACCACCCTCGTCTCTCCCTATGTCCACATCACCTTCCATGAATTAACCGGCGAACGCCTCAAGCGCAGCGAAGCTTTCACCGCCATCCAAACCTATCTCAGCGGCAACTCCTCGCAACGAGCCAATAGGCTCAAAGCCGAAGTCATCAAGGACAGCCAAACCCCTCTCATGCTTAGCCTCGACGACAACGAAGAAATCACCGACGAGTTTCAGGGGATTAAACTCTGGTGGATCTCCAGGAAGTTCAGCCCCAAATCTCAGTCCTTCTCCTTCTACCCTACTTCTGATGACCGGAGATTCATCACTCTCACTTTCCACCGCCGTCATCGCGATCTCATCACTACGAAATACCTCAGACACGTGTTAGATGAAGGTAAGGCCATTTCCACCAGAAACAGGCAGCTCAGGCTTTACACAAACAATTCAAGCAGTGGCTGGTATGGCTATAAAAGCACCAAGTGGAGCCATGTCGTTTTTGAGCACCCTGCAACTTTTGAAACACTCGCTTTACATCCAAAGAAGAAGGACGAGATTCTCAAGGATCTTGTCAGGTTCCAAAATGCGAAGAATTATTATGCGAAGATCGGCAAGGCGTGGAAGCGTGGGTATTTACTCTATGGTCCTCCGGGGACCGGTAAGTCAACGATGATCGCAGCGATGGCTAATTTCTTGAACTACGATATCTATGATGTGGAATTGACGGCGGTGAAGGACAACACGGAGCTCAGGAAGTTATTGATCGAAACTCCAAGTAAGTCGATTATGGTGATCGAAGACATTGATTGCTCCCTTGATCTTACCGGTCAAAGGAAGAAGAAGCCAAATGAAACAGAGGAGGAGGACGACGATAAGCTCAAAGACCCAGTCAAGAAGGAGGAGGAAGAAGAGAAAAAGATGAGTAAGGTGACTCTATCTGGGTTGTTAAATTTCATTGACGGGATTTGGTCTTCTTGTGGAGGAGAGAGGATAATTGTGTTCACAACTAATTTTGTGGATAAGCTTGATCCTGCTCTTATTAGGAGAGGACGCATGGATAAGCACATTGAATTGTCTTATTGTTGCTTTGAAGCATTCAAGGTGCTTGCGAGGAATTACTTGGATGTCGAAACTCACGATTTGTTTCCCAGAATTGAGGAATTGTTGAAGGAGACGGAGATGACGCCTGCTGATGTAGCTGAGAATCTGATGCCCAAGTCAATGGAGGAAGATGAACGGAGTTGCTTGCAAAGGTTGATTGAAGCACTTGAAACAGCCAAGCAGGAAGCACAGAAGAAGGCAGAAGAAGAAGAAGAAGCGAAGAAGAAGGCAGAGGAGGAAGCGAAGAAGAAAGCAGAGAAAGAAGCCAAGGAGAAGGAACAGTCTGCTGAGCAAGAGGGGAGACGGAATGAGAATTCTGGGGAAGGAGTGACGGAAAATGGTTTCCGTTGA 1557 0.474 MDMTTVWAQLGSVTATVMFLYAMFDKFFPPPLRDHLRSYTNKLTTLVSPYVHITFHELTGERLKRSEAFTAIQTYLSGNSSQRANRLKAEVIKDSQTPLMLSLDDNEEITDEFQGIKLWWISRKFSPKSQSFSFYPTSDDRRFITLTFHRRHRDLITTKYLRHVLDEGKAISTRNRQLRLYTNNSSSGWYGYKSTKWSHVVFEHPATFETLALHPKKKDEILKDLVRFQNAKNYYAKIGKAWKRGYLLYGPPGTGKSTMIAAMANFLNYDIYDVELTAVKDNTELRKLLIETPSKSIMVIEDIDCSLDLTGQRKKKPNETEEEDDDKLKDPVKKEEEEEKKMSKVTLSGLLNFIDGIWSSCGGERIIVFTTNFVDKLDPALIRRGRMDKHIELSYCCFEAFKVLARNYLDVETHDLFPRIEELLKETEMTPADVAENLMPKSMEEDERSCLQRLIEALETAKQEAQKKAEEEEEAKKKAEEEAKKKAEKEAKEKEQSAEQEGRRNENSGEGVTENGFR 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1749 518 MobiDBLite consensus disorder prediction 312 339 - -
Alju03g1749 518 Coils Coil 441 504 - -
Alju03g1749 518 CDD RecA-like_BCS1 221 393 - -
Alju03g1749 518 MobiDBLite consensus disorder prediction 461 508 - -
Alju03g1749 518 MobiDBLite consensus disorder prediction 461 518 - -
Alju03g1749 518 SMART AAA_5 242 397 IPR003593 GO:0016887
Alju03g1749 518 Pfam ATPase family associated with various cellular activities (AAA) 247 394 IPR003959 GO:0005524|GO:0016887
Alju03g1749 518 FunFam AAA-ATPase ASD, mitochondrial 198 391 - -
Alju03g1749 518 Gene3D - 392 463 - -
Alju03g1749 518 PANTHER BCS1 AAA-TYPE ATPASE 9 467 - -
Alju03g1749 518 Pfam Domain associated at C-terminal with AAA 28 122 IPR025753 -
Alju03g1749 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 469 IPR027417 -
Alju03g1749 518 ProSitePatterns AAA-protein family signature. 365 384 IPR003960 GO:0005524|GO:0016887
Alju03g1749 518 Gene3D - 196 391 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1749 Alju-ChrAlju03 45626013 45627569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1749 217 393 Calmodulin-binding Proteins AT3G56690 27.027 1.83e-10 62.0