Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1746 ATGATGACAATTAAAGGAGGGTCAAACAAGGCCTGCGCTGCATGCAAATATCAGAGAAGAAGATGTTCAAAGGACTGTGCTCTCGCTCCTTATTTTCCTTCCGATCAGCCAAACAAATTCAGTAACGCTCACCGTTTGTTTGGAGTCGCCAACATCAAGAAGATTCTGGATCAGGTAGAGCCCAGGCAGAGGGACGAAGCTATGAAATCGATTATCTTTGAATCTAATATGCGAGAACAGTTTCCTGTTATGGGATGTTTAGGACTCATATGTAACTATAATAATCAGGTACTTGCTGCCATGGAAGAGCTGCGGTATGCGAATCTAAAACTTTCGGTTTATAGGGAACAATATCATTATCAAATTTCCCAAAAAAATTCTCCTTCCATGTCAATGGAATTTATGCCTGTTAGTAGTATAGATCCCTTCTCGATGTCAAACCACTTACAATATGGTAACAGTGAAGTTGTTAGATCAACAAACCACTTACAATATGATAACAATGAAGTTGTTACATTTGATGGAGGCGGTGGTGGAAATGAAGTATTTGGTTTGCAACAATCCATCAACCCTATGACTGCACAATCAACTAATTTCATAGTCAACCATCAACCAGAAATGGACATAGTTGAATGTGACGATTTTAATCCTTATAATGAAATGTTTGATGACAAGCCATTACTTATGGAATACAAAGAACAACCATGTGATGAATCGAGTAAGGACTCATCATTAAAAGAAGCAAGGTTTCACATTAAGCCTGACCGAAGGCTAAACTCAGATGCAGCAGTGGTCCAACTAGTATGA 807 0.3879 MMTIKGGSNKACAACKYQRRRCSKDCALAPYFPSDQPNKFSNAHRLFGVANIKKILDQVEPRQRDEAMKSIIFESNMREQFPVMGCLGLICNYNNQVLAAMEELRYANLKLSVYREQYHYQISQKNSPSMSMEFMPVSSIDPFSMSNHLQYGNSEVVRSTNHLQYDNNEVVTFDGGGGGNEVFGLQQSINPMTAQSTNFIVNHQPEMDIVECDDFNPYNEMFDDKPLLMEYKEQPCDESSKDSSLKEARFHIKPDRRLNSDAAVVQLV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1746 268 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 144 - -
Alju03g1746 268 Pfam Lateral organ boundaries (LOB) domain 11 106 IPR004883 -
Alju03g1746 268 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1746 Alju-ChrAlju03 45595753 45596831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1746 2 115 AS2 family AT3G47870 56.140 2.22e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju03g1746 LOB 1.3e-35 No_clan