Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1733 ATGATACAGAAAATGGAAATGATAATGCAAAATGAAGAGAGCATAGGAAGAAGTAGGATGTGCATGGAAGGATGTGACTTCCAAGGAACTCGTAGCGTCAAGAGACGAAGAAGAGAGCATGAAGCAGCATCACTTAACTGTGATGATAATCTAAGTCAGAAGAGACAGCAAGTTGATCAAAATTCCATTACCCACACTGTGAAGAGAAGTTCAAGATTTCGAGGTGTCAGCAGACACAAATGGACTGGTCGGTATGAGGCTCACCTGTGGGACAAGCTCTCTTGGAATGTAACACAGAAGAGGAAAGGGAAGCAAGGAGCTTATGATGAAGAAGCGTCTGCAGCCAGAGCATATGATTTAGCTGCACTGAAATACTGGGGAACATCGACTTCCACCAATTTTCCTATATCAGAGTACATGAAAGAGATAGAGATAATGCAGCCTATGACAAAAGAGGAGTATTTGGCCACTTTAAGAAGAAAAAGTAGTGGCTTTTCAAGAGGCGTGTCAAAGTACAGGGGTGTTGCAAGGCACCACCAAAATGGGAGATGGGAAGCAAGGATAGGGAGGGTTTTTGGAAACAAATATCTCTACCTTGGCACTTACAGCACCCAGGAGGAAGCTGCTCGTGCTTACGACATTGCGGCCATTGAGTTCAGAGGGATTCATGCTATAACCAACTTTGATTTGAGCAATTACATAACACAGTTAAGGCCTGCCAGAGGAAATATCCAAGAACCAACACCTGAATCACAGATCGTACCAGCGGTTCAGGCTATGGCGTCTTCTTTAAATTATACTTCAACAGAGGAGTCCAAAACCTTGGCCCTTGACAGCAATTTGTTTAACACAGATTACCTGACGTCTTCACAAAAGCAAGAGGTCCTTGAGAAGGAAACTGCTTTTATCTCAAGCAACAAGTCATCTTCACCTACAGCTCTTGGCCTTCTTCTCCGGTCTTCAATTTTCAGGGAATTAGTGGAAAAGAATTTGAATATGTTTGGAGATGAAATTGATGGGGAAGACGCAAAGGATCAACAAACAAATATATCAGGTGATGATGAGTTGAGTAGAATATTCTACGATAGTATTGGCGATACACCATTTGCCAATGATCCTAAAAGATACAATTTTGCAAGAGATCTCCATTGTTTTACGAATGGAGAAACACAGAATTTCTAA 1182 0.4188 MIQKMEMIMQNEESIGRSRMCMEGCDFQGTRSVKRRRREHEAASLNCDDNLSQKRQQVDQNSITHTVKRSSRFRGVSRHKWTGRYEAHLWDKLSWNVTQKRKGKQGAYDEEASAARAYDLAALKYWGTSTSTNFPISEYMKEIEIMQPMTKEEYLATLRRKSSGFSRGVSKYRGVARHHQNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEFRGIHAITNFDLSNYITQLRPARGNIQEPTPESQIVPAVQAMASSLNYTSTEESKTLALDSNLFNTDYLTSSQKQEVLEKETAFISSNKSSSPTALGLLLRSSIFRELVEKNLNMFGDEIDGEDAKDQQTNISGDDELSRIFYDSIGDTPFANDPKRYNFARDLHCFTNGETQNF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1733 393 SMART rav1_2 72 141 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 SMART rav1_2 171 235 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 Gene3D AP2/ERF domain 71 137 IPR036955 GO:0003700|GO:0006355
Alju03g1733 393 Gene3D AP2/ERF domain 170 231 IPR036955 GO:0003700|GO:0006355
Alju03g1733 393 CDD AP2 71 137 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 ProSiteProfiles AP2/ERF domain profile. 171 229 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 PRINTS Ethylene responsive element binding protein signature 211 231 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 MobiDBLite consensus disorder prediction 46 64 - -
Alju03g1733 393 ProSiteProfiles AP2/ERF domain profile. 72 135 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 SUPERFAMILY DNA-binding domain 170 231 IPR016177 GO:0003677
Alju03g1733 393 MobiDBLite consensus disorder prediction 43 64 - -
Alju03g1733 393 CDD AP2 170 231 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 SUPERFAMILY DNA-binding domain 71 137 IPR016177 GO:0003677
Alju03g1733 393 Pfam AP2 domain 170 221 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 Pfam AP2 domain 71 127 IPR001471 GO:0003700|GO:0006355
Alju03g1733 393 FunFam AP2-like ethylene-responsive transcription factor 170 231 - -
Alju03g1733 393 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 49 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1733 Alju-ChrAlju03 45480291 45482258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1733 68 284 AP2-EREBP Transcription Factor Family AT5G57390 57.333 4.10e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Alju03g1733 AP2 3.7e-09 CL0081