Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1729 ATGGGGATTGGGAGGAGGGTGGCTGATAAGAAAGGCAAGAACATTTCTGAATTACCCGAAGAGACGAATACCAACAGCAAATCAAAGAAGAACCGGCGACGTCAGAAGAAGACGTCGCCGGTTCAAAAACTATTCAAGACATGCAAGGAAGTGTTTGTCTCTGGTGGCCCTGGGATTGTTCCGCCCCCTCAAGACATTGAGAAGCTGCGGGCTGTTTTAGATGCAATTACACCAGAAGATGTCGGCTTGAAGCCTGATATGCCATATTTCAGGACAAACACCGTCCAAAGATTCCCGAGAATTACGTACCTGCACATCTTTGAGTGTCCAAAGTTCTCGATGGGAATATTTTGCTTGCCGCCTTCTGGTGTTATTCCTCTTCATAATCACCCTGGAATGACCGTTTTCAGTAAACTACTTTTTGGGACTATGCACATCAAATCTTATGATTGGGTGGCTGACTTGCCCCCTCAAACTTCCACCAGTCTCCAACCAATGGAAATTCAGAGTGCAGAGGTGCGGTTGGCTAAAGTGAAGGTTGATGCTGACTTCACTGCTCCTTGCGGCCCCTCCATCCTTTATCCGGCCGATGGAGGAAACATGCATCGCTTCACGGCAGTAACAGCATGCGCAGTTCTCGATGTCCTCGGCCCTCCATACTCCGACCCGGACGGCAGGCACTGCACTTACTACCTTAATTATCCCTTTTCCAACTTTTCAGTTGATGGAGTATGCATAGCAGAAGAGGAAAAGAAGATTCATGAGTGGCTTCAAGAGAGGGAGAAACCTGAGGATTTAGAAGTAGTTGGACACCATTTCAAAGGAAGGTATTACAACCATCGGTGCATACTTCAGGCCTGCGTTGCTGCGGTAGGTAAAGTTCCTTTTGCTCTATGCACTATGCACTACGTACGTCCTCGTTCATGCAGAAGCTATTTATACCAGGTAAGAGAAAAGGTCAGCTTCTTGACCACGGCAAAAATGTCTGGTAGTGCTTGTGGTCTAGAGACTGGAAAAAAGAGAACAGTTTCCATTTGCCTTGAAGAAGATTGCTGTGTTCAAGAGAATGATGAACTCAAGTCGGGTAAAGAAGAGATGGGTGGACAGAAAGAAGAAAATGAAGAAAGGTTGAAGATGAAAAATTACCAGTCCCTCCAACTGCGTTTCTTTGATATCTTGCGAAGAGAAGCTTCTGAAAAAGTTATAGCAGATTCAGCTAATTCCCATGATGAAACTGAAGAGCCTGAGCTCGTGTCACTTTGCCTGGGAAGAAGTCCAAGGGACCCCAAAAAAGAAACAAGAATCGGAAACACTGATAAACATAAAGAAAGTGAAGATCTGGAGGCTTGCCTTACCCTTGGATTAGACTCCAATTGTGAGTTATCAATGGAGATGGTGTCTGATCAGAGCCCAGGAAACAGCTCAGGGGAAACTAAGGAAGCAGAAATAGAGGGAACATGGCAATCAAATAAATCTGTCAAGGCCAAAAATGGAGAAGATCATGAAATTTCAGAGCAGATACCTGCTAAGAAAGCGAGAGTTTCTGTGAGAGCAAGATGTGATACCCCCACGATGAGTGATGGATGCCAGTGGAGAAAATATGGACAGAAGATAGCCAAAGGGAATCCTTGTCCACGTGCATACTATCGCTGCACGGTTGCTCCAGCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGCTGAGGACATGTCTATCTTAATCACTACATATGAAGGGACCCACAACCACCCACTTCCAGTTTCAGCTACAGCCATGGCTTCCACTACTTCAGCTGCTGCTTCCATGTTATTGTCAGGTTCTTCAACATCTCAGCCTGCAGATAACAGTTTTGCATCATTCACAAATGCTCCTACACTGCTTAATGGCCAAAACCTTGGACATTTTGATCTATCAAAATCAAAACAGGTCTTTTTGCCCAACCCTGCCTCACCTTTGTTCCCAACAATCACTCTAGACTTAACTTCTGGTCCATCCTCATCAACCCATGTCAATAATTATCTCCCTTCAAGCTTTGCTTTAAACCCAAGATTTCCTCCAAGTAGTCTAAGTTTTTGCTCAAAGGAGCCCAACATTCAACAAGCAGTGTGGGGTAATGGAATCCTTAATAATGAGAAAACCCACATGAGGTCAGTTGACCTGGGAACTCAATTTCAACAACAGTTCCATCAAAACTGCCTGCAAAACCAAGCTCCTTCTTCACAAGAGGCTTTAGCAGAAACCTTAACCAGAGCAATCAGTACGGATCCTAGACTTCGATCAGTAATAGCTGCAGCAGTTTCATCTATAGTGGGTCAAGGATCCACCAATGTGAACCAAGCAAGGGGAGGGGAAATTTTAGAGTTAGGGTTGAACTTGAAACTAGGAGAGCATTCTCAATTTGCTTCTTCTAATCTGTTGACCCAAAATGGGAAAGGATGCTTGCCAGGTTATTTCAACAGATTGTCATCAAATTCCTATGCCGGAAACTTCATGCCTCTACAACCTCCGGTTCCATTTTCTGTCTCTAAGGGAAAAGTGCCTCCCATCATTAGTGATCAGATCAATCATTAA 2571 0.4457 MGIGRRVADKKGKNISELPEETNTNSKSKKNRRRQKKTSPVQKLFKTCKEVFVSGGPGIVPPPQDIEKLRAVLDAITPEDVGLKPDMPYFRTNTVQRFPRITYLHIFECPKFSMGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDWVADLPPQTSTSLQPMEIQSAEVRLAKVKVDADFTAPCGPSILYPADGGNMHRFTAVTACAVLDVLGPPYSDPDGRHCTYYLNYPFSNFSVDGVCIAEEEKKIHEWLQEREKPEDLEVVGHHFKGRYYNHRCILQACVAAVGKVPFALCTMHYVRPRSCRSYLYQVREKVSFLTTAKMSGSACGLETGKKRTVSICLEEDCCVQENDELKSGKEEMGGQKEENEERLKMKNYQSLQLRFFDILRREASEKVIADSANSHDETEEPELVSLCLGRSPRDPKKETRIGNTDKHKESEDLEACLTLGLDSNCELSMEMVSDQSPGNSSGETKEAEIEGTWQSNKSVKAKNGEDHEISEQIPAKKARVSVRARCDTPTMSDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPADNSFASFTNAPTLLNGQNLGHFDLSKSKQVFLPNPASPLFPTITLDLTSGPSSSTHVNNYLPSSFALNPRFPPSSLSFCSKEPNIQQAVWGNGILNNEKTHMRSVDLGTQFQQQFHQNCLQNQAPSSQEALAETLTRAISTDPRLRSVIAAAVSSIVGQGSTNVNQARGGEILELGLNLKLGEHSQFASSNLLTQNGKGCLPGYFNRLSSNSYAGNFMPLQPPVPFSVSKGKVPPIISDQINH 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1729 856 Gene3D WRKY domain 510 587 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1729 856 ProSiteProfiles WRKY domain profile. 520 586 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1729 856 CDD cupin_ADO 110 221 - -
Alju03g1729 856 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 355 779 IPR044810 GO:0003700
Alju03g1729 856 Pfam WRKY DNA -binding domain 527 584 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1729 856 MobiDBLite consensus disorder prediction 466 508 - -
Alju03g1729 856 Gene3D Jelly Rolls 32 248 IPR014710 -
Alju03g1729 856 Pfam PCO_ADO 72 275 IPR012864 GO:0016702
Alju03g1729 856 MobiDBLite consensus disorder prediction 425 442 - -
Alju03g1729 856 MobiDBLite consensus disorder prediction 494 508 - -
Alju03g1729 856 SUPERFAMILY RmlC-like cupins 38 233 IPR011051 -
Alju03g1729 856 MobiDBLite consensus disorder prediction 404 442 - -
Alju03g1729 856 MobiDBLite consensus disorder prediction 466 493 - -
Alju03g1729 856 SUPERFAMILY WRKY DNA-binding domain 518 586 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1729 856 SMART WRKY_cls 525 585 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1729 856 MobiDBLite consensus disorder prediction 1 28 - -
Alju03g1729 856 FunFam probable WRKY transcription factor 31 510 587 - -
Alju03g1729 856 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1729 Alju-ChrAlju03 45432558 45442855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1729 366 821 WRKY Transcription Factor Family AT5G15130 42.771 6.41e-77 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju03g1729 PCO_ADO 2.9e-69 CL0029