Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g1720 | ATGGCCTTCCCTCCTTCTCACACTTTCATGTTTCACACCAATCACTCCCATGAAGATCATCACCACCATCATCATCATCACGACCCCCAGTTCTCTTCATCACCATCTCTCAAATCTTTCCCTCCATTACCACCCCAACACTTTCAAACTCGGAATAGTGCACCCTTCATGGTGAAGAGATCGATGTCGTTTTCAGGGATAGAGAGCAAGTGCGACATGGAGGTCGTGAACGGAGGCGATGACGATTTGTCGGACGATGGGTCGGTGCAGATAGGGGAGAAGAAGAAGAGGCTGAACATGGAGCAGGTGAAGGCACTTGAGAAGAGCTTTGAGGTTGGGAACAAGCTTGAGCCAGAGAGGAAACTGGAGCTGGCTAAGGCTTTGGGGCTGCAGCCACGTCAGATCGCCATTTGGTTTCAGAACAGGAGAGCCCGATGGAAGACCAAGAACCTCGAGAAAGAATATGAGTCCCTCAAGAAACAGTTTGAAGCTCTCAAGGCTGATAACGATGCTCTTAACCTTCAAAACCAGAAACTTCATGCTGAGTTACAAGCTCTGAAAGGAAGAGATCATCAGTGTGAAGGCGGAACAGTAGTGAGGCTGGTGAAGAAAGAAGCGGAGGGTTCATGGAGCAATAATAATAGAAGTGACAGCAGTTCAGACATCAATTTGGACCTTTCAAGAACACCACTTAGAGACAGTCCTGTTGGTAAAAGCCATCAGCTCGTAGCAGGCTCTAACAATAATCTAAAGCCCGCCAGCATAACACAACTCCTCCAGTTCTCAACAAGATCAGACCTCCAAGACGAAACCTTCTCCAACATATTCAACACCACCAACACTACTACTATCGATGATGATCATAATCAGCAGCACAACTTCTGGACCTGGCCTCACGAACACCGCCACCATTTTCATTGA | 921 | 0.4756 | MAFPPSHTFMFHTNHSHEDHHHHHHHHDPQFSSSPSLKSFPPLPPQHFQTRNSAPFMVKRSMSFSGIESKCDMEVVNGGDDDLSDDGSVQIGEKKKRLNMEQVKALEKSFEVGNKLEPERKLELAKALGLQPRQIAIWFQNRRARWKTKNLEKEYESLKKQFEALKADNDALNLQNQKLHAELQALKGRDHQCEGGTVVRLVKKEAEGSWSNNNRSDSSSDINLDLSRTPLRDSPVGKSHQLVAGSNNNLKPASITQLLQFSTRSDLQDETFSNIFNTTNTTTIDDDHNQQHNFWTWPHEHRHHFH | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g1720 | 306 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 68 | 232 | IPR045224 | GO:0003700 | |
| Alju03g1720 | 306 | Pfam | Homeodomain | 94 | 147 | IPR001356 | GO:0003677 | |
| Alju03g1720 | 306 | Gene3D | - | 88 | 158 | - | - | |
| Alju03g1720 | 306 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
| Alju03g1720 | 306 | FunFam | Homeobox-leucine zipper protein ATHB-13 | 85 | 153 | - | - | |
| Alju03g1720 | 306 | Pfam | Homeobox associated leucine zipper | 149 | 188 | IPR003106 | GO:0006355|GO:0043565 | |
| Alju03g1720 | 306 | Coils | Coil | 141 | 189 | - | - | |
| Alju03g1720 | 306 | MobiDBLite | consensus disorder prediction | 32 | 52 | - | - | |
| Alju03g1720 | 306 | SMART | HOX_1 | 92 | 153 | IPR001356 | GO:0003677 | |
| Alju03g1720 | 306 | CDD | homeodomain | 94 | 150 | IPR001356 | GO:0003677 | |
| Alju03g1720 | 306 | ProSitePatterns | 'Homeobox' domain signature. | 124 | 147 | IPR017970 | GO:0000981|GO:0006355 | |
| Alju03g1720 | 306 | MobiDBLite | consensus disorder prediction | 208 | 227 | - | - | |
| Alju03g1720 | 306 | SUPERFAMILY | Homeodomain-like | 85 | 151 | IPR009057 | - | |
| Alju03g1720 | 306 | PRINTS | Lambda-repressor HTH signature | 120 | 129 | IPR000047 | GO:0003677 | |
| Alju03g1720 | 306 | PRINTS | Lambda-repressor HTH signature | 129 | 145 | IPR000047 | GO:0003677 | |
| Alju03g1720 | 306 | MobiDBLite | consensus disorder prediction | 208 | 237 | - | - | |
| Alju03g1720 | 306 | ProSiteProfiles | 'Homeobox' domain profile. | 89 | 149 | IPR001356 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju03g1720 | Alju-ChrAlju03 | 45395718 | 45397450 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g1720 | 1 | 298 | Homeobox Transcription Factor Family | AT5G15150 | 44.753 | 5.98e-70 | 218 |
Transcription factors information