Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1716 ATGCTGAAAAACCCCAAGATCCTTCTTTTAGATGAAGCAACCAGTGCTCTTGATGCTGGTTCAGAAAGCATTGTTCAAGAAGCACTAGATCGCCTTATGGTCGGTCGTACAACTGTAGTTGTAGCCCATCGTTTATCCACCATAAGGAATGTTGACAGCATCGCAGTTATACAGCAAGGGCAAGTTGTTGAGACAGGAACTCATGAAGAGCTTATTGCCAAGGCAGGGACCTATGCTTCACTAATAAGGTTCCAAGAAATGGTGGGAAATAGGGACTTCTCCAACCCATCAACTCGCCGGACACGTTCATCGCGGCTCAGCCATTCGCTTTCGACCAAGTCTTTAAGCCTCAGGTCTGGAAGCCTGAGGAACCTCAGTTACCAGTACAGCACTGGGGCGGATGGTCGCATTGAGATGATATCAAATGCTGAAACAGACAAGAAGAATCCTGCTCCTGATGGATACTTCTTCCGTTTACTCAAGTTGAATGCCCCTGAATGGCCTTACTCAATAATGGGAGCTGTAGGATCTATTCTCTCTGGTTTTATTGGCCCAACTTTTGCCATTGTTATGAGCAATATGATTGAGGTGTTTTACTTTAGAAATTATGCATCCATGGAGAGGAAGACTAAGGAGTACGTCTTCATCTACATTGGAGCAGGTCTTTATGCCGTTGGGGCATATTTGATACAGCATTACTTCTTCAGTATTATGGGTGAAAATCTCACCACAAGGGTTCGAAGAATGATGCTTGCCGCAATTTTAAGGAATGAAGTAGGATGGTTCGATGAAGAAGAGCACAACTCAAGCCTAGTTGCAGCTCGCCTTGCCACTGATGCTGCTGATGTGAAATCTGCTATTGCTGAGAGGATCTCAGTGATTTTGCAGAACATGACATCTCTTCTCACTTCTTTCATTGTTGCTTTCATTGTGGAATGGAGAGTTTCCTTGCTCATCCTGGGAACCTTCCCTCTTCTTGTTCTAGCTAACTTTGCTCAGCAACTCTCTCTGAAAGGGTTTGCTGGAGACACAGCCAAGGCTCATGCAAAGACGAGTATGATTGCCGGAGAGGGAGTCAGTAACATCAGAACGGTCGCTGCGTTCAATGCCCAAAACAAGATCATATCTTTATTCTGCCACGAGCTTCGGGTCCCACAAAGCCGGAGTTTAGGCCGGAGCCAAACTGCCGGCCTCCTATTTGGCATCTCCCAGCTTGCCCTTTATGCCTCCGAAGCACTCATCCTGTGGTACGGCTCGCATCTTGTGAGCAAAGGCATGTCGACCTTCTCAAAGGTCATAAAAGTTTTCGTCGTCCTAGTCATCACAGCCAACTCCGTCGCAGAAACCGTCAGCCTCGCCCCTGAAATAATCAGAGGCGGTGAAGCTGTCGGTTCTGTCTTCTCCATTCTCGATCGTCAAACTAGGATCGACCCAGACGATCTCGACGCTGAGCCAGTTGAGTCCATTCGCGGGGAGATTGAACTAAGACATGTCGATTTTGCCTACCCATCACGACCAGACGTGATGGTGTTTAGAGATCTTAATCTCAGAATCCGTGCAGGGCAGAGTCAGGCTCTGGTGGGGGCCAGTGGGTCAGGAAAAAGTTCTGTCATTGCATTGATCGAGCGTTTCTATGACCCCGTAGCAGGAAAAGTCATGATTGATGGAAAAGACATTAAAAGATTGAACTTGAAGTCCCTAAGGCTAAAGATTGGTTTAGTGCAACAGGAGCCTGCTCTGTTTGCGGCAAGCATTTTCGACAACATAGCTTATGGAAAAGATGGAGCAACAGAAGCAGAAGTAATCGAAGCTGCTCGTGCAGCGAATGTTCATTCATTTGTTAGTAGTTTGCCTGAGGGATACAAGACACCAGTTGGTGAAAGAGGGGTTCAATTATCGGGTGGGCAAAAACAGAGGATAGCTATTGCCAGAGCAGTTCTTAAGGACCCCACAATACTTCTCCTAGACGAGGCCACAAGTGCACTTGATGCTGAATCAGAGTGTGTCCTACAAGAAGCACTAGAGAGGCTAATGAGGGGTCGAACCACCGTGCTTGTGGCTCATCGCTTATCGACCATAAGAGGGGTGGACAGTATCGGAGTGGTGCAAGATGGGCGAATTGTGGAGCAGGGGAGCCATGCAGAACTTGTGAGCAGACCAGAGGGTGCATATTCTAGACTCTTGCAGCTACAAAATCATCACATGTGA 2208 0.4733 MLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIAKAGTYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYFFRLLKLNAPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYFRNYASMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKIISLFCHELRVPQSRSLGRSQTAGLLFGISQLALYASEALILWYGSHLVSKGMSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRQTRIDPDDLDAEPVESIRGEIELRHVDFAYPSRPDVMVFRDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPVAGKVMIDGKDIKRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKDGATEAEVIEAARAANVHSFVSSLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDSIGVVQDGRIVEQGSHAELVSRPEGAYSRLLQLQNHHM 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1716 735 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 85 IPR027417 -
Alju03g1716 735 Pfam ABC transporter transmembrane region 171 442 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1716 735 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 495 729 IPR003439 GO:0005524
Alju03g1716 735 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 171 458 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1716 735 CDD ABC_MTABC3_MDL1_MDL2 493 731 - -
Alju03g1716 735 Gene3D ABC transporter type 1, transmembrane domain 110 463 IPR036640 GO:0005524|GO:0016020
Alju03g1716 735 Gene3D ABC transporter type 1, transmembrane domain 464 490 IPR036640 GO:0005524|GO:0016020
Alju03g1716 735 PANTHER ABC TRANSPORTER B FAMILY 143 730 IPR039421 -
Alju03g1716 735 Pfam ABC transporter 512 660 IPR003439 GO:0005524
Alju03g1716 735 FunFam ABC transporter B family member 1 150 459 - -
Alju03g1716 735 ProSitePatterns ABC transporters family signature. 632 646 IPR017871 GO:0005524|GO:0016887
Alju03g1716 735 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 731 IPR027417 -
Alju03g1716 735 SMART AAA_5 520 706 IPR003593 GO:0016887
Alju03g1716 735 SUPERFAMILY ABC transporter transmembrane region 152 473 IPR036640 GO:0005524|GO:0016020
Alju03g1716 735 CDD ABC_6TM_Pgp_ABCB1_D2_like 160 476 - -
Alju03g1716 735 FunFam ABC transporter B family member 19 483 732 - -
Alju03g1716 735 Gene3D - 491 733 IPR027417 -
Alju03g1716 735 Gene3D - 2 109 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1716 Alju-ChrAlju03 45349044 45352623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1716 1 731 Calmodulin-binding Proteins AT2G36910 52.133 0.0 769