Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1715 ATGGCTGAAGCTACAGAGTCTAAAGCATTGCCGGACGCTGAGAAGAAGAAGGAGCAGAGTTTGCCATTTTACCAGCTCTTCTCTTTTGCAGACAAGTATGACTGGCTCCTTATGATCTCTGGGAGCTTAGGAGCAGTTGTTCATGGCTCATCCATGCCTGTTTTCTTCCTTCTTTTTGGTGAGATGGTCAATGGGTTTGGCAAAAACCAGATGGATTTGAAGAAAATGACTGAAGAAGTATCGAAGTATGCTCTGTATTTTGTGTACCTGGGCCTCGTTGTTTGCATATCATCCTACGCAGAAATTGCGTGCTGGATGTATACCGGGGAGAGACAAGTGGGCACGCTGAGAAAGAAGTACTTGGAGGCGGTGCTTAAACAGGACGTTGGGTTCTTTGACACAGATGCAAGAACAGGGGATATCGTTTTTAGTGTATCCACTGACACTCTGCTCGTCCAAGATGCCATTAGCGAGAAGGTAGGAAACTTCATACATTATTTGTCAACTTTCCTGGCGGGTCTGGTGGTTGGTTTTGTGTCAGCATGGAGGCTAGCTCTTCTAAGTGTTGCAGTGATTCCGGGCATTGCTTTTGCTGGTGGGTTGTATGCTTACACACTCACAGGCCTCACCTCCAAGAGTCGCGAATCCTATGCGAATGCTGGAATAATCGCCGAGCAGGCGATTGCTCAAGTTCGAACTGTGTACTCGTATGTTGGTGAGAGTAAGGCCTTGAATTCTTATTCTGATTTGATACAAAACACACTGAAGCTCGGATACAAGGCGGGAATGGCTAAAGGTTTAGGCTTGGGATGTACGTATGGGATAGCTTGCATGTCATGGGCGTTAGTGTTTTGGTATGCTGGAGTTTTCATCAGGAATGGCCAAACTGATGGAGGAAAGGCATTCACTGCTATTTTCTCTGCCATTGTTGGTGGCATGAGTTTGGGGCAGTCATTTTCAAATTTAGGGGCATTTAGTAAAGGCAAAGCAGCAGGATACAAACTGATGGAAATCATTAAGCAGAAACCCACCATAGTGGAAGACCTATCTGAGGGGAAGTGCTTGTCAGAGATTAATGGAAATATTGAGCTTAAGGATGTAAGTTTCAGCTATCCATCAAGGCCAGATGTACTCATCTTCTGCAATTTCTCAATCTTTTTTCCTGCTGGCAAAACTGTTGCGGTTGTTGGCGGTAGTGGTTCAGGGAAAAGCACCGTTGTTTCCTTGATAGAAAGGTTCTACGATCCTAATGAAGGGCAAGTTTTATTGGATAACGTAGACATCAAGACACTACAATTAAAATGGTTACGTGACCAAATTGGGCTGGTGAATCAAGAACCTGCACTATTTGCAACCACCATACTTGAGAATATACTCTACGGCAAACCTGGTGCAACCATGGCTGAAGTAGAAGCGGCTGCCTCTGCTGCAAATGCTCATAGCTTTATTACCTTGCTTCCTAATGGATATAACACTCAGGTGGGGGAGTGA 1491 0.45 MAEATESKALPDAEKKKEQSLPFYQLFSFADKYDWLLMISGSLGAVVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTEEVSKYALYFVYLGLVVCISSYAEIACWMYTGERQVGTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDLIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDLSEGKCLSEINGNIELKDVSFSYPSRPDVLIFCNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPGATMAEVEAAASAANAHSFITLLPNGYNTQVGE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1715 496 Gene3D - 352 496 IPR027417 -
Alju03g1715 496 Gene3D ABC transporter type 1, transmembrane domain 25 351 IPR036640 GO:0005524|GO:0016020
Alju03g1715 496 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 327 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1715 496 PANTHER ABC TRANSPORTER B FAMILY 3 496 IPR039421 -
Alju03g1715 496 Pfam ABC transporter transmembrane region 43 312 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1715 496 Pfam ABC transporter 382 475 IPR003439 GO:0005524
Alju03g1715 496 SUPERFAMILY ABC transporter transmembrane region 26 347 IPR036640 GO:0005524|GO:0016020
Alju03g1715 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 496 IPR027417 -
Alju03g1715 496 CDD ABC_6TM_Pgp_ABCB1_D1_like 38 335 - -
Alju03g1715 496 FunFam ABC transporter B family member 1 25 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1715 Alju-ChrAlju03 45346423 45348992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1715 12 496 Calmodulin-binding Proteins AT2G36910 54.845 0.0 554