Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1710 ATGGAGGAGAAGAACGAAATAGATATATTTGATGATATTCTGCTGCCTGGTTTTCGGTTTCATCCGACAGACGAGGAGCTTGTTGACTTCTACCTCAAGAAAAAAATACAGCAAAAGACTCTGCCTTTTGACATCATTAAGCAAGTGGATATTTACAAGTACGACCCATGGGATCTTCCAAAGATGGCAAGCAGTAGTAGTGAAAAAGAGTTATACTTTTACTGTCAAAGAGATAGAAAATACAGAAACAGTGCTCGCCCAAATAGAGTGACCAGAGCTGGGTTCTGGAAGGCCACTGGAACTGATCGACCAATATACTCTTCAAAGGGAAATTGCATCGGTTTAAAGAAGTCTCTTGTGTTCTACAGAGGCAGAGCCGCCAAAGGCATCAAAACTGAATGGATGATGCATGAGTTTCGCCTTCCTTCTCTTTCTGATTCTTCTCTTCCCAGAAACCTCTCTCATAAAACCCTCTCTCCCACTGAGTCATGGGCAATTTGTAGGATATTCAAGAAAACCACCTCACACAAACCTTCATCTCATTCTCACCCCTGCATCCCTCAGTTCCCAGAGAGCTTGCCGGTGAGTGATATACTCACTCAGGGTGGTGGTGCCACTGCCTCCGGCAACCACTTCAGTAAAGAAAATATCTTAGGCGCGTATTTTTCAGCTTCAGATGTTCCCTTTTACAAACCCATGGAAGTGTCAGGATCCATGATTTTGAACTCAGATTGGGAAGGATTTGAAGGGGCAAGCCAGCAATTTAGTCAGGGCATGCAGGGGAATATAAACATAGCAACAGGGTTTTCTTTCGCTGCACCTGCTTCTGGGGATGTTTGGAAATCTCCTCTGCTATGGGACACCCCTTTGTTCAACTGA 879 0.4425 MEEKNEIDIFDDILLPGFRFHPTDEELVDFYLKKKIQQKTLPFDIIKQVDIYKYDPWDLPKMASSSSEKELYFYCQRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSKGNCIGLKKSLVFYRGRAAKGIKTEWMMHEFRLPSLSDSSLPRNLSHKTLSPTESWAICRIFKKTTSHKPSSHSHPCIPQFPESLPVSDILTQGGGATASGNHFSKENILGAYFSASDVPFYKPMEVSGSMILNSDWEGFEGASQQFSQGMQGNINIATGFSFAAPASGDVWKSPLLWDTPLFN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1710 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 190 - -
Alju03g1710 292 FunFam NAC domain-containing protein 35 23 175 - -
Alju03g1710 292 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Alju03g1710 292 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Alju03g1710 292 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Alju03g1710 292 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1710 Alju-ChrAlju03 45315353 45316462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1710 2 187 NAC Transcription Factor Family AT5G39820 64.878 4.12e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju03g1710 NAM 1.6e-35 No_clan