Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1704 ATGGATTTAACCCCCTCCATCGCCAACAACATCAACACCACCACCACCGCAACCAATACTCCTACTAGTACAAAATCCCCAGAACATGACAGTGAAACTCCGACCCGGATCCAGACCGCCGCCAAGCCCTTGTCCTTCTCCAACGGCGTCCTAAAGCGACACCACCACCACCACCACCGCCTCCCCACCCACCCACTCCCTGTCACGTACAAGGAATGCTTGAAAAACCATGCAGCCAGCTTAGGAGGCCACGCCCTCGACGGTTGTGGCGAGTTCATGGCCTCTCCCACCTCCAACCCCGCCGACCCCAGCTCCATCAAATGCGCCGCCTGTGGCTGCCACCGCAATTTCCACCGCCGCGAGCCTGAAGAACCTATCTCCACAACCCACGTCATCGAGTACCAGTCTCACCATCGACACCACCCCCCGCCGCCTCCGCCTTTCCAGGTTTCCAATCGAAGCCCCAATTCAGCGTCGCCACCTCCGATCTCCTCTTCGTACTACCCGTCTGCACCCCATATGCTTCTGGCTCTCTCTGCCGCCGGGATACAAGCTCCTCCTGAGAGCGCGGCTGCTCCCGCCAACGTTATGACAACGCCGAGCCCGAATGCGCGGAAGCGGTTCAGGACCAAGTTCACCCAGGATCAGAAGGAGAAGATGTACCATTTCGCAGAGAGGGTGGGTTGGAAGATGCAGAAGAGGGACGAAGACTTGGTTCAAGAATTCTGCAATGAGGTTGGGGTTGACAGGGGAGTGTTGAAGGTTTGGATGCACAACAACAAGAGCACTTTTGGCAAAAGAGATGCTGCTAATAATAATAATGATGATGGTAGGAACACTCTAGAGCAAGACCCTCACGCCCTCACCGCCGGAATCCATGCCAACAAGGACAACGGCAGCGCGCAGGATCCGAATCACCACCACCTCTTTGCTACCAACGATAATAGTGGGGCAAACCTTGGTACTAATGGGTCCTCTTCGTCCTCTTGA 990 0.5616 MDLTPSIANNINTTTTATNTPTSTKSPEHDSETPTRIQTAAKPLSFSNGVLKRHHHHHHRLPTHPLPVTYKECLKNHAASLGGHALDGCGEFMASPTSNPADPSSIKCAACGCHRNFHRREPEEPISTTHVIEYQSHHRHHPPPPPPFQVSNRSPNSASPPPISSSYYPSAPHMLLALSAAGIQAPPESAAAPANVMTTPSPNARKRFRTKFTQDQKEKMYHFAERVGWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKSTFGKRDAANNNNDDGRNTLEQDPHALTAGIHANKDNGSAQDPNHHHLFATNDNSGANLGTNGSSSSS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1704 329 MobiDBLite consensus disorder prediction 295 329 - -
Alju03g1704 329 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 41 263 - -
Alju03g1704 329 MobiDBLite consensus disorder prediction 263 329 - -
Alju03g1704 329 Gene3D - 194 265 - -
Alju03g1704 329 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 69 121 IPR006456 -
Alju03g1704 329 Pfam ZF-HD protein dimerisation region 68 122 IPR006456 -
Alju03g1704 329 FunFam Zinc-finger homeodomain protein 2 193 266 - -
Alju03g1704 329 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 70 121 IPR006456 -
Alju03g1704 329 SUPERFAMILY Homeodomain-like 200 266 IPR009057 -
Alju03g1704 329 MobiDBLite consensus disorder prediction 1 36 - -
Alju03g1704 329 NCBIfam homeobox domain, ZF-HD class 205 261 IPR006455 -
Alju03g1704 329 MobiDBLite consensus disorder prediction 264 278 - -
Alju03g1704 329 MobiDBLite consensus disorder prediction 133 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1704 Alju-ChrAlju03 45266604 45267593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1704 25 284 ZF-HD Transcription Factor Family AT3G28920 53.846 3.21e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju03g1704 ZF-HD_dimer 1e-28 No_clan