Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1701 ATGAAAGATTACACAACAATTTGTCCTGAACAACTTCTGACCAACCCGACCGACCAGGCATCTTCTTCGTGTAGCCCAAGCCACATTGCGATTCCGGTGGACCAGATCATGAGTGCAGATATGGAGGCTGATAAGGCCAAGAGCTGGGCCGCAAGCAATGATATGGACAAGGAACAGAAGCCTCAGGAAGGCGAGCCAAAAGCGGAATGTCGTTTTTGTCACTATGAGGACTGCATCTCCAGATTTGAAGCACCTTGTCGTTGCAGTGGCACTTTGATGTATGCTCACAAGAGTTGCATCCAGAAGTGGTGCAATATCAAAGGGAACACCACTTGTGAGATCTGCCGCCAGCCTTACCGTCCAGGTTATGCTGTCAAAGCACGGAGCTCTTCCAATAACCGCGAGGACGATGACAGTGCTGGTGGAAAGGCGACGGATCGAGCGGCGGCGGCTCTGAATGAAGACTGTGACTTCAGACATCCCACTGGAGTCGTTCTGTGCGGAACCGGCGCCCTCATCTGTCTGGTGCTTAATTGCACTGGCTCCGTTCTACGTATTGTCCTTGATTTACGAATGCCGACTGTGGAGATACTTCCGGGAAAGGTACCGATCGCAGTGACTACTTGTGCTCCATGGAAGGGTCTGATTGTGCAACATGATCAGAATCTGGGGACTTGCAGCTCAAATTCATCGCTTAGGAGTTATGCAGAGAGAAACTGA 720 0.5083 MKDYTTICPEQLLTNPTDQASSSCSPSHIAIPVDQIMSADMEADKAKSWAASNDMDKEQKPQEGEPKAECRFCHYEDCISRFEAPCRCSGTLMYAHKSCIQKWCNIKGNTTCEICRQPYRPGYAVKARSSSNNREDDDSAGGKATDRAAAALNEDCDFRHPTGVVLCGTGALICLVLNCTGSVLRIVLDLRMPTVEILPGKVPIAVTTCAPWKGLIVQHDQNLGTCSSNSSLRSYAERN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1701 239 SMART ringv_2 69 116 IPR011016 GO:0008270
Alju03g1701 239 MobiDBLite consensus disorder prediction 47 63 - -
Alju03g1701 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 131 IPR013083 -
Alju03g1701 239 CDD RING_CH-C4HC3_MARCH 70 116 - -
Alju03g1701 239 SUPERFAMILY RING/U-box 66 120 - -
Alju03g1701 239 Pfam RING-variant domain 70 115 IPR011016 GO:0008270
Alju03g1701 239 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 28 186 IPR033275 -
Alju03g1701 239 MobiDBLite consensus disorder prediction 42 63 - -
Alju03g1701 239 ProSiteProfiles Zinc finger RING-CH-type profile. 62 122 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1701 Alju-ChrAlju03 45234640 45238138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1701 66 145 C3H Transcription Factor Family AT2G37950 34.066 9.29e-08 49.3