Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1698 ATGCAGACGACAAGTCAAAATGTGTGGAGCTTCAATCCTGAAACAGAGCAGCCGGACGACCCAAGAACCCATAAACGACCTTTTCTTCTTCTTCCCTTCGCAAAACTTGCACAGAATTATCCTCCTGGTTTTCTTCGAAAGGTACTGGCAGAGATTATAGGAACATATCTGCTGGTGTTTGTGGGAAGTGGGTCGGCTGCTCTTAATGCTTATGATGAGCAGAAAATATCAAAACTAGGAGCTTCACTTGCAGGAGGATTCATAGTGATTGTGATGATCTATGCCATCGGACACATCTCTGGTGCTCACATGAACCCAGCTGTATCCTTAGCTTTTGCCGCTGTGAAGCATTTTCCATGGAAACAGGTCCCATTATACGTGGCAGCACAATTGATCGGAGCCATTTCTGCCTCGTTCACGTTGCGGCTGATATTGGACCCAATAAAACAGCTTGGAACAACCTCACCTTCTGGAAGTGACGCCCAAGCTCTCGCCATGGAGATAGTGGCAACGTTCACTATGATGTTCATCGCCTCCGCCGTGTCAACTGATGCAAAAGCTGTCGGAGAGCTCGCAGGAATCGCAGTAGGCTCTTCAATATTCATAGCAGGCATCCTTGCAGGACCTATATCAGGGGGATCAATGAACCCAGCAAGAACACTTGGTCCTGCAATAGCAAGTGGATCCTATAAAGGACTTTGGGTCTATCTGGTGGGACCAGTTACTGGGGCACTTTTGGGAGCATGGTCTTACACTACTATTAAAGAGACAGAAGAACCAGCTCCGGCCACTTCACTGATATCATTTCCCTTCGCGCTAGGCTCAAAGAATAGGGAAACTGAGCATGTTAAAAGCAAAGACAAGCGACAAATTATGAGTGAAAATAATGTTTAA 894 0.4642 MQTTSQNVWSFNPETEQPDDPRTHKRPFLLLPFAKLAQNYPPGFLRKVLAEIIGTYLLVFVGSGSAALNAYDEQKISKLGASLAGGFIVIVMIYAIGHISGAHMNPAVSLAFAAVKHFPWKQVPLYVAAQLIGAISASFTLRLILDPIKQLGTTSPSGSDAQALAMEIVATFTMMFIASAVSTDAKAVGELAGIAVGSSIFIAGILAGPISGGSMNPARTLGPAIASGSYKGLWVYLVGPVTGALLGAWSYTTIKETEEPAPATSLISFPFALGSKNRETEHVKSKDKRQIMSENNV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1698 297 Pfam Major intrinsic protein 44 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1698 297 SUPERFAMILY Aquaporin-like 40 262 IPR023271 -
Alju03g1698 297 MobiDBLite consensus disorder prediction 278 297 - -
Alju03g1698 297 MobiDBLite consensus disorder prediction 1 16 - -
Alju03g1698 297 PANTHER AQUAPORIN NIP2-1 26 265 IPR034294 -
Alju03g1698 297 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Alju03g1698 297 MobiDBLite consensus disorder prediction 1 23 - -
Alju03g1698 297 CDD MIP 46 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1698 297 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1698 297 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1698 297 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1698 297 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1698 297 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1698 297 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1698 297 NCBIfam MIP family channel protein 50 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1698 297 Gene3D Glycerol uptake facilitator protein. 18 263 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1698 Alju-ChrAlju03 45205356 45207573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1698 46 260 Major Intrinsic Protein MIP AT5G37820 51.613 2.11e-73 226