Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1697 ATGCAGAGAACAAGTGAAAACATGCGCAGCTTGAACACTGAAACAAATCAGCCGCAAAACCCTCCTGCCCAGAACCAATGTGCTGGGGACCACTCCATTGCAAGACTTCCTGGTTTTCGCAGGAAGGTATTGGCAGAGCTAATAGGGACATATCTATTGGTGTTTGTGGCAAGTGGGACGTCTGCACTTAGTTCCGTTGATGACAAGAAAGTATCACAACTAGGAGCTGAACTTGCCGCCGGATTCATTGTCATGGTCATGGTCTATGCCACCGGTCACATCTCCGGCGCCCATATAAACCCAGCTGTCTCCATAGCTTTCGCCGCTGCCGGCCATTTCCCATGGAAACAGGTCCCATTTTACGTGGGAGCTCAAACGACAGGAGGCATTGCTGCTTCATTTACGCTAAGACTGTTATTGCATCCTATAAAAAAGCTGGGAACAAACTCTCCTTCTGGAACAGATGCTCAAGCTCTTGTCATGGAGATCCTCATCACTTTCATTCTCATGTTTGTTATCTGCGCCGTCACCACTGATTCCAAAGCTGTTGGAGACCTGGCAGGAGTTGCAATAGGCTTTTCAGTGGGCATAGGAAACATCCTTGGAGGGCCAATATCGGGCGGATCATTGAATCCAGCAAGAACATTGGGTCCAGCAATAGCAAGTGGGTCCTACAAAGGAGTTTGGGTCTATCTGGTTGGACCAACTGTTGGGGCCGTTTTAGGGGCATGGTCCTACAGTGCTATCCAGGACAATGATAATAACTCTGCTTCCTCCATTAACCTAACTTCATTTATATCCAAGCTACGCTCCATGAATAATAAGGAAGCTAATGAGCAAGACGATCCACAAGTCGTGCGTCCGAACGGAGTTTAA 876 0.4795 MQRTSENMRSLNTETNQPQNPPAQNQCAGDHSIARLPGFRRKVLAELIGTYLLVFVASGTSALSSVDDKKVSQLGAELAAGFIVMVMVYATGHISGAHINPAVSIAFAAAGHFPWKQVPFYVGAQTTGGIAASFTLRLLLHPIKKLGTNSPSGTDAQALVMEILITFILMFVICAVTTDSKAVGDLAGVAIGFSVGIGNILGGPISGGSLNPARTLGPAIASGSYKGVWVYLVGPTVGAVLGAWSYSAIQDNDNNSASSINLTSFISKLRSMNNKEANEQDDPQVVRPNGV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1697 291 Gene3D Glycerol uptake facilitator protein. 2 259 IPR023271 -
Alju03g1697 291 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Alju03g1697 291 SUPERFAMILY Aquaporin-like 34 250 IPR023271 -
Alju03g1697 291 MobiDBLite consensus disorder prediction 1 27 - -
Alju03g1697 291 PANTHER AQUAPORIN NIP2-1 15 254 IPR034294 -
Alju03g1697 291 MobiDBLite consensus disorder prediction 1 29 - -
Alju03g1697 291 Pfam Major intrinsic protein 39 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1697 291 CDD MIP 41 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1697 291 NCBIfam MIP family channel protein 45 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1697 291 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1697 291 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1697 291 PRINTS Major intrinsic protein family signature 161 179 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1697 291 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1697 291 PRINTS Major intrinsic protein family signature 229 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju03g1697 291 PRINTS Major intrinsic protein family signature 192 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1697 Alju-ChrAlju03 45202773 45204415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1697 41 282 Major Intrinsic Protein MIP AT5G37820 47.131 1.63e-72 224