Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1694 ATGTCTTCGCCAACCGACTCGCCGGAATCATCATCGTCTTTCCCAACCGCCGACGAATTGGAAGACCACCAAATTCGAAGGCTCACTCTGCTTCTCCCTTTCATTTTCAGTTTAGCTGCCCGCCGCCGTCACAACCAATTACACGACGAAGATTCCATCATCGATCTTCCCCTCCGGGTCATCCTCTTTAACCCTGCCACCAGAACCACCGTCATGATCGACCGATCCATTGACTTGGCCTCGCTGCTGGAGGAGGTGTCTACGAAGCCCGGGCTGTTGCCGGCGTCCAAGGATTCCATGGCGGCCATGCCCACCGTCGTGATCACAGAAGAAGAAGATTCTGATCAGTGTGCGATTTGCTTGGAAGATTACGTCATTGGGGAGGAGGCCAGGGAGATGCCCTGCAAGCATAGGTTTCACCCTCGTTGCATCGACAAGTGGTTGGGCATTTATGGCGTGTGCCCTGTTTGCCGATTCCCGATGCCCGTGGACGTCGAGCTCGACGGCGGCGAAACGACGGAGTGA 525 0.5581 MSSPTDSPESSSSFPTADELEDHQIRRLTLLLPFIFSLAARRRHNQLHDEDSIIDLPLRVILFNPATRTTVMIDRSIDLASLLEEVSTKPGLLPASKDSMAAMPTVVITEEEDSDQCAICLEDYVIGEEAREMPCKHRFHPRCIDKWLGIYGVCPVCRFPMPVDVELDGGETTE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1694 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 164 IPR013083 -
Alju03g1694 174 PANTHER SI:CH211-59O9.10 94 161 - -
Alju03g1694 174 SUPERFAMILY RING/U-box 111 164 - -
Alju03g1694 174 FunFam E3 ubiquitin-protein ligase RNF181 83 164 - -
Alju03g1694 174 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Alju03g1694 174 SMART ring_2 117 157 IPR001841 -
Alju03g1694 174 Pfam Ring finger domain 115 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1694 Alju-ChrAlju03 45170649 45171173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1694 26 164 C3H Transcription Factor Family AT1G26800 43.972 6.46e-34 117