Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1683 ATGGGTCGGTCACCATGCTGCGACAAGGTGGGCTTAAAGAAAGGGCCATGGACTCCTGAGGAAGATCAGAAACTGTTAGCTTATATCGAAGAACACGGCCATGGAAGCTGGCGTGCCTTGCCAGCAAAAGCTGGACTTCAGAGGTGTGGCAAGAGCTGCAGACTGAGATGGACCAATTATCTTAGACCTGATATAAAGAGAGGAAAGTTCAGCCTGCAAGAAGAGCAAACCATCATTCAACTCCATGCCCTCCTTGGAAACAGGTGGTCGGCTATAGCAACACACTTGCCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAATACGCATCTCAAGAAAAGGTTAGCCAAAATGGGAATTGACCCAGTGACCCACAAGCCCAAGAATGATGCCCTTCTCTCCATCGACGGCCAATCCAATAAGAGTGCTGCCAACCTTAGTCACATGGCTCAGTGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGGTTGGTTAGAGAATCAAAACTACGTTCACATTCATTGCAGCAGCACCAGCTTTGCAACTCTGGGTTTTCATCTTCATCTTCTGCTTCAACTTCATCAGCTCCAGTTGCGAATAAACCAGAGGGACCACCTATTTCCTCTCGCTCTCTAGATGTTCTAAAGGCGTGGAATAATGGAGGTTGGTTGAAATCTACTGATGGCCATAATGTTGGTGGTGGCGACCTTGAATCCCCTTCTTCTTCCCTGACTTTCTCTGAGAACGCTCCACCGATTATTACCAGTGGACTCGGAGAAAGTACAATGCCTATGATCGAGTTTGTTGGCTCGTCTGGTTCTTCAGAGACAGGATTTGTGAAAGAGGAAGGTGAACAAGAATGGAAAGGTTATGAAAGCTCTGTTCATCTTCCAGAATACAAAGATGGTATTGATAACACCATGTCTTTTGCATCTAGCCTGCATGAGTTGACAATGTCATTGGAAGGCACGTGGACTACGTCTGAGTCTCTTAGGACTAGCACTGATGCTATCGTTGAGGAAGGGTTCACCAATCTTTTGCTTAATACTAACTCCGATGACCCGAGTTTGTCGGAGGAGGGCGGAGGAGAGTCTAATAATAACTGTGACGGTAATGGATCAGGCGGCAGTGGGAGTGACCTCTATGAAGATAACAAGAACTACTGGAACAGCATTCTTAATTTAGTCAACTCTTCCCCTTCTGACTCTCCCATGTTCTGA 1221 0.4636 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLSIDGQSNKSAANLSHMAQWESARLEAEARLVRESKLRSHSLQQHQLCNSGFSSSSSASTSSAPVANKPEGPPISSRSLDVLKAWNNGGWLKSTDGHNVGGGDLESPSSSLTFSENAPPIITSGLGESTMPMIEFVGSSGSSETGFVKEEGEQEWKGYESSVHLPEYKDGIDNTMSFASSLHELTMSLEGTWTTSESLRTSTDAIVEEGFTNLLLNTNSDDPSLSEEGGGESNNNCDGNGSGGSGSDLYEDNKNYWNSILNLVNSSPSDSPMF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1683 406 CDD SANT 69 112 IPR001005 -
Alju03g1683 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 195 - -
Alju03g1683 406 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju03g1683 406 CDD SANT 16 61 IPR001005 -
Alju03g1683 406 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju03g1683 406 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju03g1683 406 FunFam MYB transcription factor 69 116 - -
Alju03g1683 406 SMART sant 66 114 IPR001005 -
Alju03g1683 406 SMART sant 13 63 IPR001005 -
Alju03g1683 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju03g1683 406 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju03g1683 406 MobiDBLite consensus disorder prediction 227 247 - -
Alju03g1683 406 FunFam MYB-related transcription factor 13 66 - -
Alju03g1683 406 MobiDBLite consensus disorder prediction 174 199 - -
Alju03g1683 406 Gene3D - 69 116 - -
Alju03g1683 406 MobiDBLite consensus disorder prediction 173 210 - -
Alju03g1683 406 Gene3D - 13 66 - -
Alju03g1683 406 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju03g1683 406 MobiDBLite consensus disorder prediction 350 381 - -
Alju03g1683 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1683 Alju-ChrAlju03 45096845 45098868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1683 1 406 MYB Transcription Factor Family AT3G01140 51.914 6.89e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju03g1683 Myb_DNA-binding 1.5e-15 CL0123