Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1670 ATGGCACCTCGTGTAATCACGGTTTCACAGACCGGAAGCGGAGACTATCGGACGGTGCAGGAAGCAATTGATTCCGTTCCACTGGGAAACAACCGTCGGACGGTGATTCGAGTGTCTCCGGGAATCTACAAGCAACCAGTGTACGTACCCAAGACTAAGAATTTCATCACCCTTGCTGGGCTGTGCCCGGAAGATACTGTGCTTACCTGGAATAATACCGCGACCAAAATCGAACACCACCAGGCTGCTCGGGTAATAGGTACTGGTACTTTTGGCTGTGGTAGTACTATTGTGGAAGGAGAGGATTTTATTGCCGAGAACATTACGTTCGAGAATTCCTCCCCTCAGGGTTCAGGGCAAGCTGTGGCAATTAGAGTGACAGCAGATCGATGTGCCTTCTATAACTGCAGGTTCCTAGGATGGCAGGACACTCTGTACTTACACTATGGCAAACAGTACATGAAAGATTGTTACATTGAAGGGAGCGTGGACTTTATTTTTGGCAATAGCACTGCTCTTTTGGAACATTGCCATATTCACTGCAAGGCTCAAGGCTTCATAACTGCACAGAGCAGAAAATCTTCTCATGAAACAACTGGTTATGTATTCTTAAGATGTGTCATAACGGGTAATGGAGATTCATACGCATATCTTGGACGCCCATGGGGACCTTTTGGAAGAGTGGTCTTTGCATACACTTATATGGATCCATGTATAAGGCCTCACGGCTGGAATAATTGGGATAAAGTCGAGAATGAGAGAACTGCTTGCTTTTATGAATACAGGTGTCATGGACATGGTTGCTGTCCATCCAAACGAGTAGCATGGGCTAGAGAATTGATGGATGAAGAAGCAGGGCAGTTCCTATCACATACTTTCATTGACCCAGATGCTGATAGACCTTGGCTTGCTCAAAGAATGGCTTTGAAGATTCCCTATTCTGCTTAG 948 0.4599 MAPRVITVSQTGSGDYRTVQEAIDSVPLGNNRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCPEDTVLTWNNTATKIEHHQAARVIGTGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYMKDCYIEGSVDFIFGNSTALLEHCHIHCKAQGFITAQSRKSSHETTGYVFLRCVITGNGDSYAYLGRPWGPFGRVVFAYTYMDPCIRPHGWNNWDKVENERTACFYEYRCHGHGCCPSKRVAWARELMDEEAGQFLSHTFIDPDADRPWLAQRMALKIPYSA 315
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1670 315 Gene3D - 2 309 IPR012334 -
Alju03g1670 315 Pfam Pectinesterase 6 295 IPR000070 GO:0030599|GO:0042545
Alju03g1670 315 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Alju03g1670 315 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 302 - -
Alju03g1670 315 SUPERFAMILY Pectin lyase-like 2 302 IPR011050 -
Alju03g1670 315 FunFam Pectinesterase 2 308 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju03g1670 Alju-ChrAlju03 45009024 45012770 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1670 4 308 Carbohydrate Esterase AT5G47500 39.683 1.08e-71 224