Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1665 ATGATTAGTTTTCTTCTCTTCGGCTACGGTTTAATTTGCGTGCACCCATATCTGAAAATGGATGGATCTGTTCGAGGTAGTACTGGTGTGGACGCGTATCTACCAAATTATAAATTAGGGAAAACACTTGGTATTGGATCCTTTGGCAAGGTGAAAATTGCAGAGCATGTTTTGACAGGTCACAAAGTTGCCATTAAGATCCTCAACAAACGTAAAGTAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCATCCTCACATCATACGACTTTATGAAGTCATAGAAACCCCAACAGACATATTTGTTGTGATGGAGTATGTAAAATCTGGAGAGCTCTTTGACTACATAGTGGAAAAGGGTAGGTTGCAAGAAGATGAAGCTCGTAATTTTTTTCAGCAGATTATCTCTGGAGTGGAGTACTGTCACAGGAATATGGTGGCTCATAGAGACTTGAAGCCTGAGAATTTGCTGTTGGACTCCAAATGCAGTGTTAAGATTGCAGATTTTGGTCTGAGCAACGTCATGATTGATGGTCATTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTAATCTCTGGAAAATATTATGCTGGGCCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATACGCTCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAATATTCCAAACCTTTTCAAGAAAATAAAGGGTGGGATATACACTCTTCCTAGTCATTTATCACCCGGTGCTAGAGATCTGATACCCAGGATGCTTGTGGTTGATCCTATGAAAAGGATGACCATACCTGAGATCCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGTTATTTGGCAGTGCCACCGCCCGATACTTTACAACAAGCCAAAAAGATTGACGAGGAAATTCTTCAGGAAGTGGTTACTATTGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGATACAAAATGAGGCTACCGTGACATATTATTTGCTATTGGACAATCGATTCCGTGTTTCAAGCGGCTATCTTGGTGCTGAGTTTCAAGAGAGTATGGATACTGGTTATAATCGTATGCATCCTAGTGAAGTTGCTGCTCCAGCGGTTGGGAACCGCTTTCCAGGAGGGTATATGGATTATCAAGGAGCTGGATTGAGGCCACAGTTCCCTGCTGAGAAAAAATGGGCCCTTGGGCTTCAGTCTCGGGCCCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTGAATGTGTGCTGGAAGAAGATTGGACACTATAACATGAAGTGCCGCTGGGTTGCTGGCATTCTGGGTCATAGTGAAGGAATGATGAACAATCATAATCATTACTTTGGAGATGATTCGGCTATTATTGAGAATGATGCGGTTTCCAAGTCAAACGTAGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTCCAAAGGGTCCATGGCCCACAGTTTCTCTTCTTGGATCTTTGTGCTTCTTTCCTGGCACAGCTACGTGTCCTCTAG 1593 0.4231 MISFLLFGYGLICVHPYLKMDGSVRGSTGVDAYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNKRKVKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIFVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCSVKIADFGLSNVMIDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTLQQAKKIDEEILQEVVTIGFDRNQLVESLRNRIQNEATVTYYLLLDNRFRVSSGYLGAEFQESMDTGYNRMHPSEVAAPAVGNRFPGGYMDYQGAGLRPQFPAEKKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGILGHSEGMMNNHNHYFGDDSAIIENDAVSKSNVVKFEMQLYKTREEKYLLDLQRVHGPQFLFLDLCASFLAQLRVL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1665 530 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 35 332 - -
Alju03g1665 530 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Alju03g1665 530 SUPERFAMILY Protein kinase-like (PK-like) 34 307 IPR011009 -
Alju03g1665 530 CDD STKc_AMPK_alpha 34 289 - -
Alju03g1665 530 FunFam Non-specific serine/threonine protein kinase 26 116 - -
Alju03g1665 530 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 310 350 IPR015940 -
Alju03g1665 530 Gene3D Kinase associated domain 1, KA1 414 528 - -
Alju03g1665 530 Pfam UBA/TS-N domain 311 347 IPR015940 -
Alju03g1665 530 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 481 529 IPR001772 -
Alju03g1665 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Alju03g1665 530 Pfam Protein kinase domain 37 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1665 530 Pfam Kinase associated domain 1 487 529 IPR001772 -
Alju03g1665 530 FunFam Non-specific serine/threonine protein kinase 28 367 - -
Alju03g1665 530 SMART serkin_6 37 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1665 530 FunFam Non-specific serine/threonine protein kinase 414 528 - -
Alju03g1665 530 Gene3D Transferase(Phosphotransferase) domain 1 28 369 - -
Alju03g1665 530 CDD UBA_SnRK1_plant 311 351 - -
Alju03g1665 530 ProSiteProfiles Protein kinase domain profile. 37 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1665 530 SUPERFAMILY KA1-like 346 529 IPR028375 -
Alju03g1665 530 CDD AMPKA_C 408 527 - -
Alju03g1665 530 SMART uba_6 312 349 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1665 Alju-ChrAlju03 44976760 44982924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1665 37 290 CBL-interacting serine-threonine protein kinases AT2G26980 52.918 2.10e-91 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Alju03g1665 Pkinase 1.1e-79 CL0016