Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1664 ATGGGTTGCATTAACTCCAAAAATGTGGTTGCCGGAGATTCACCCGAGCACCCGAAGGTGCGCACCGACGATGGGTTTGCTATTGTGGAGGCTCCGTCCAGATCCCGGTCGGGGATGTTAGCTTCTGCCAGTAAAAGGGATCCGAAATCGGAGGACAGCAATCGAGATGGGAAGAAGTCCGGGAAGGATAGCTCCAAAGAAGGCGGGAATTACAGTTTGAAGATGGGGCTTTCGCATCGGTTCGTGGAAGCGGAGCTGAATGCGGCTGGATGGCCCCCTTGGCTATCAGCTGCTGCCGGCGAAGCTATTCATGGATGGGTGCCCCTCAGAGCAGATGCTTTTGAGAAATTAGAGAAGATTGGGCAAGGTACATATAGCAGTGTGTTCCGAGCACGTGAAGTTGAAACTGGGAGGATGTTTGCGCTGAAGAAGGTGCGGTTTGACAATTTTCAGCCTGAGAGCGTGAGGTTCATGTCAAGGGAAATTACAATTCTTCGCAGGCTTGACCATCCAAACGTTATGAAATTGGAGGGTGTAATTACATCCCGACTATCAAGTAGTTTATACCTAGTGTTTGAATATATGGAGCATGATCTTGCCGGACTAGTATCTTGTCCTGATATAACGTTCACTGATTCACAGGTGAAATGTTACATGAGGCAACTACTGAGTGGACTTGAGCACTGTCACCTACGTGGTATCATCCATCGGGACATTAAAGTATCCAATATATTAGTAAATAATGATGGTGTACTCAAGATAGGCGATTTTGGGTTGGCAAATACAATTAGCTCAAGCAATAAGCATCCATTAACCAGTCGCGTAGTGACTCTATGGTACCGTCCTCCTGAACTCTTGATGGGATCAACCAACTATGGATTATCAGTGGATCTATGGAGTGTGGGTTGTGTGTTTGGTGAACTTTTTCTAGGGAAACCTATCCTCAAGGGGAGAACTGAGGTTGAACAATTGCACAAAATTTTTAAGCTTTGCGGTTCACCACCTGAAGAATTCTGGAAAAACTGCAAGCTTCCTCATGCAACAATGTTTAAACCTCAGACTACTTACGAAGGCTCATTTTCCGAGAGGTTTCAAGGTATTCCTGAAACTGCTATAAACCTAATGAAGACTCTACTATCCTTTGATCCCCATGAGCGTGGAACTGCCTCTTCTGCTCTGATGTCTGAGTATTTCAGCACCAAGCCGCTTGCTTGCGATCCTTCAAGGCTGCCAAAATATCCACCCAGCAAAGAAATAGATGCTAAAAATCGGGAGGACGTTCGAAGGAAAAAGACCGATGGTAAAGTGGATGAGGCTGCGACATCAAGAAAGCAAAGACGAGTCCGTAAAGTCTTACAAGAACCAAACAATTTCAGTAACCCAGCTTCAACCGATGAAAAGCAGAACAATTCTTCAGAAGCTGTAAAAAACGATGTTAAAACAAATTTTAACAGGGGAAAAGGAGGAGCTAAGCATAGAGAACCATCAAAGCCTTCAACGGAAGCAATGTCAGAGACCTTCCAGATCAATGGCGTACCTCATGGCTTCAGTATATTAGCAGGACCACCACCAGCCTCAGGTGCTAGTGGCTTTGCATGGGCAAAAAGGAGAAAACCAGAGGCTTCATCCACATTATCAGATGGTTCAAAAAGCAAAATTAGCGCACTGGATCCAACCTTTGCAAGAGGCACATATGATTTAACCAGACATGTGATGGATGTCGCAGAAAGAAAATATAAGGACAACCCAAGCCATCAGGCTCGGCATATTCGGCATGAACATGTTGATGCATCTGACAAATATTCCACGCAAAAACCAGATGACGTGGTGAATACTCAGGGCCACAAAAGACTTGGCAATGAAATCACACGCCACGCAGCTGGGAAATCAAGATTAGGAAGGACCCGTGCGAGCATTAAACACGATTTTTTCCCCCATTACTGGCTTACAGCTGGTTTCGAGTCACAGGAGTTCTGGTTTTGCGGACAGCCCTCTGCTCATTGCGAAAGCATCGAAGGAGAATACGAGGATCTATAA 2037 0.4556 MGCINSKNVVAGDSPEHPKVRTDDGFAIVEAPSRSRSGMLASASKRDPKSEDSNRDGKKSGKDSSKEGGNYSLKMGLSHRFVEAELNAAGWPPWLSAAAGEAIHGWVPLRADAFEKLEKIGQGTYSSVFRAREVETGRMFALKKVRFDNFQPESVRFMSREITILRRLDHPNVMKLEGVITSRLSSSLYLVFEYMEHDLAGLVSCPDITFTDSQVKCYMRQLLSGLEHCHLRGIIHRDIKVSNILVNNDGVLKIGDFGLANTISSSNKHPLTSRVVTLWYRPPELLMGSTNYGLSVDLWSVGCVFGELFLGKPILKGRTEVEQLHKIFKLCGSPPEEFWKNCKLPHATMFKPQTTYEGSFSERFQGIPETAINLMKTLLSFDPHERGTASSALMSEYFSTKPLACDPSRLPKYPPSKEIDAKNREDVRRKKTDGKVDEAATSRKQRRVRKVLQEPNNFSNPASTDEKQNNSSEAVKNDVKTNFNRGKGGAKHREPSKPSTEAMSETFQINGVPHGFSILAGPPPASGASGFAWAKRRKPEASSTLSDGSKSKISALDPTFARGTYDLTRHVMDVAERKYKDNPSHQARHIRHEHVDASDKYSTQKPDDVVNTQGHKRLGNEITRHAAGKSRLGRTRASIKHDFFPHYWLTAGFESQEFWFCGQPSAHCESIEGEYEDL 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1664 678 MobiDBLite consensus disorder prediction 452 479 - -
Alju03g1664 678 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Alju03g1664 678 Gene3D Phosphorylase Kinase; domain 1 101 196 - -
Alju03g1664 678 MobiDBLite consensus disorder prediction 45 65 - -
Alju03g1664 678 SMART serkin_6 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1664 678 MobiDBLite consensus disorder prediction 1 71 - -
Alju03g1664 678 ProSiteProfiles Protein kinase domain profile. 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1664 678 MobiDBLite consensus disorder prediction 485 499 - -
Alju03g1664 678 MobiDBLite consensus disorder prediction 413 451 - -
Alju03g1664 678 FunFam probable serine/threonine-protein kinase At1g54610 101 196 - -
Alju03g1664 678 SUPERFAMILY Protein kinase-like (PK-like) 107 404 IPR011009 -
Alju03g1664 678 PANTHER CELL DIVISION PROTEIN KINASE 112 403 - -
Alju03g1664 678 MobiDBLite consensus disorder prediction 405 501 - -
Alju03g1664 678 CDD STKc_CDK9_like 114 398 - -
Alju03g1664 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Alju03g1664 678 FunFam probable serine/threonine-protein kinase At1g54610 197 437 - -
Alju03g1664 678 Gene3D Transferase(Phosphotransferase) domain 1 197 438 - -
Alju03g1664 678 Pfam Protein kinase domain 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1664 Alju-ChrAlju03 44966768 44976733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1664 106 444 Core Cell Cycle Gene Families AT5G10270 45.763 2.21e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju03g1664 Pkinase 9.2e-70 CL0016