Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1663 ATGAACAGAAAACAAATCATTGCAGTTTTCTGCTCCGTGGACTTTCTTACACTGAGTTTCAAGACTGCACGAAACCATCGATTGCGCGATTCACGAAGAAGAAAGCTCGACAGCGCCACCAGAAGAACTTCTACTTGCCAAATACGGAAATCCAACGGCGGTTGTTATCAGCTAATGGCCGCGAAGAACGGCGGATCCGCCACGGCGCAACCGCCACGCCCGACGATCACTCTACCGCCTCGCCCTTCCATGGAGTTCTTCTTCACCGGTGGCCCAGGCGCTAGCCCCGGCCCGATGACCCTCGTATCCAGCTTCTTCTCCGATAATTATCCTGACTCTGACTGTCGGTCGTTTTCTCAGTTGCTCGCCGGAGCCATGGCTTCTCCGCTTGCTCTCTGTCCGAGGCCTGGCTTCTTTCCGGATAATTCGATCGACAATTCCTCCAAAGAAGCTACTGCTGAGGATGGGGCCCAAAAGAATTCGGGTTTCAAGCAGAGTAGGCCCATGAATCTGGCTATTGCTCGTTCACCATTGTTCACCGTTCCACCTGGGTTAAGCCCTTCTGGGTTGCTCAACTCACCGGGCTTCTTTCCCCCGCAGAGCCCCTTTGGGATATCCCATCAGCAGGCTTTGGCACAGGTTCAAGCTCAAGCTGTCCTGGCACAATCTCATATGCACATGCAAGGGGATCATCAACAACCTGCCATAACAGCTCCTGGTGAACCATTGGCACAGCAGCCATCTTTTGTTCCAAGTGAAGCTTCAGATCAGCAAGTTGTACCATCCGCATCAGATTCTAAAAGTGCTCAAATGGAGACTTCAGATGTTTCTCACACTGATAAGAAATACCAACTTTCTTCCTTAGCCATTGATAAACCTGCAGACGATGGCTACAATTGGCGTAAGTATGGGCAGAAGCAGGTTAAAGGCAGTGAGTACCCACGGAGCTACTACAAGTGTACACATCTGAATTGCCCAGTAAAGAAAAAGGTTGAGCGTGCCCCTGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAATCATGAACTGCCTCAGCCAAACAAGCGTATCAAAGATAATTCTGATTTAAATGGAAATACAAGTGTTCAAGTTCAGTCTAACTCGACTACACAAGGATGGGTGGGAAATTTAAACAAGTTTGGTGAGAGCATACCTGATCATTCAGTGCCAGAAAGTGATCCCTCATCCAATCAAGGTGCTCTCAAGCAACTACCTGGATCAAGTGAGAGTGAGGAAGGGGGTGATGCTGATATAAGGGAAGAGGAGGGAGATGTCAGTGAGCCAAACCCCAAGAGAAGGAACACTGATCTTGAGGCTTCTGAAGTACCTATGTCTCACAAGACTGTCACGGAACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTCTGGATGATGGCTACAGGTGGCGCAAGTATGGGCAAAAAGTGGTAAAGGGAAATCCCTATCCAAGGAGTTACTACAAATGCACCAGTGCAGGATGCAATGTGCGTAAGCATGTTGAGAGGGCTTCAACAGACCCCAAAGCTGTCATAACTACCTATGAAGGAAAACATAACCATGATGTTCCTGCTGCTAAAACCAGCAGCCACAACACAGCTAATAGCAATTCAATGCAAGTAAAACCACAGAGAGTGGTGCCTGAGAAGCATCCTTTACTTAAAGATATGGATTTTGGAAATAATGACCAAAGACCAGTCGCGTTACGCTTGAAAGAAGAGCAAATCATAGTATAG 1767 0.4759 MNRKQIIAVFCSVDFLTLSFKTARNHRLRDSRRRKLDSATRRTSTCQIRKSNGGCYQLMAAKNGGSATAQPPRPTITLPPRPSMEFFFTGGPGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPLALCPRPGFFPDNSIDNSSKEATAEDGAQKNSGFKQSRPMNLAIARSPLFTVPPGLSPSGLLNSPGFFPPQSPFGISHQQALAQVQAQAVLAQSHMHMQGDHQQPAITAPGEPLAQQPSFVPSEASDQQVVPSASDSKSAQMETSDVSHTDKKYQLSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHELPQPNKRIKDNSDLNGNTSVQVQSNSTTQGWVGNLNKFGESIPDHSVPESDPSSNQGALKQLPGSSESEEGGDADIREEEGDVSEPNPKRRNTDLEASEVPMSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHNTANSNSMQVKPQRVVPEKHPLLKDMDFGNNDQRPVALRLKEEQIIV 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1663 588 FunFam WRKY transcription factor 33 461 527 - -
Alju03g1663 588 MobiDBLite consensus disorder prediction 143 167 - -
Alju03g1663 588 MobiDBLite consensus disorder prediction 432 449 - -
Alju03g1663 588 MobiDBLite consensus disorder prediction 248 273 - -
Alju03g1663 588 MobiDBLite consensus disorder prediction 345 458 - -
Alju03g1663 588 MobiDBLite consensus disorder prediction 536 553 - -
Alju03g1663 588 MobiDBLite consensus disorder prediction 222 288 - -
Alju03g1663 588 SMART WRKY_cls 294 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1663 588 SMART WRKY_cls 474 533 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1663 588 Pfam WRKY DNA -binding domain 475 531 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1663 588 Pfam WRKY DNA -binding domain 295 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1663 588 SUPERFAMILY WRKY DNA-binding domain 292 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1663 588 ProSiteProfiles WRKY domain profile. 289 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1663 588 FunFam WRKY transcription factor 281 354 - -
Alju03g1663 588 Gene3D WRKY domain 280 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1663 588 Gene3D WRKY domain 459 535 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1663 588 MobiDBLite consensus disorder prediction 531 555 - -
Alju03g1663 588 MobiDBLite consensus disorder prediction 359 386 - -
Alju03g1663 588 MobiDBLite consensus disorder prediction 398 414 - -
Alju03g1663 588 SUPERFAMILY WRKY DNA-binding domain 466 534 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1663 588 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 196 550 IPR044810 GO:0003700
Alju03g1663 588 ProSiteProfiles WRKY domain profile. 469 534 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1663 Alju-ChrAlju03 44958833 44964083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1663 73 586 WRKY Transcription Factor Family AT2G03340 52.720 2.33e-152 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju03g1663 WRKY 1.5e-25 CL0274