Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1659 ATGCCCGCTCTCTTCTCTCTCCCTAGGTGCTTGGGAACTTATTCTAGGAGTAGCAGCGGCGGCGGTGACAGTGGCCTCGACGTCGTCGTCTTCGACGACACTACTACTAGTCCAAACGCCAATTCTTCGTCCGTCGAGTGCTATGCCTGCACTCAGGTGGGCGTCCCCGTGTTCCACTCCACCAGCTGCGACAGCTATCACCCGCCGCAATGGGAGGCTTCCGCGGGCTCTTCCTTAGTCCCTATCCAGAACAAAACCACAGCGAAGAATAATCCGAGGCAACGACCCAAATCGGGGCTGTTCGGGTCAGTGTTGGACCCGAGAAGCAAGCGCGTGCAGAGGTGGAACAGGGCGCTGCTGCTGGCGCGAGGGTTGGCGCTGGCGGTGGACCCATTATTCTTCTATGCGCTGTCAATAGGGAGGGACGGCACGCCGTGCCTGTACATGGACGGCGGTTTAGCGACGATACTGACCGTGGTGAAGACGTTGGTGGACGTGGTTCACGTGTTCCACGTGTGGTTGCAGTTCAGGCTGGCGTACGTGTCGAAGGAGTCCATGGTGGTTGGTTGTGGGAAGCTGGTGTGGGACGCGCGTGCCATCGCCGCGCATTACCTGAGGTCCTTCAGAGGCTTCTGGTTCGACGCCTTTGTTATACTTCCCGTTCCTCAGGCTGTGTTTTGGCTGGTACTCCCAAAGTTGATAAGAGAAGAGCAAATTAAAATCATAATGACTCTAATGCTATTGATCTTCTTGTTTCAATTTCTGCCCAAGGTTTACCACAGCATCTGCATGATGAGGAGGATGCAAAAAGTCACGGGCTATATCTTCGGCACCATTTGGTGGGGCTTTGGCCTCAACCTCATAGCCTACCTTATTGCTTCTCACGTAGCAGGAGGGTGCTGGTATGTGCTTGCAATTCAACGAGTAGCGGCGTGCCTGAGGCAGCAGTGTGAAAGAGGGTATGGATGTGATCTCCCTCTGTCATGTTCAGATGAAGTGTGTTACAAGTTTCTGTCACCAACAGGCACAGAAGGAACTTCGTGTAATGGAAACTTCACAACAGTTGTGGCAAGAAAGCCATTGTGTTTAGATGCGCAAGGGCCTTTTAAATATGGGATCTACCAATGGGCTCTCCCAGTCATTTCCAGCAACTCTTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAATGATCTTGAGCCTACGAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTCAGCGGACTAATGCTCTTCACTCTGTTGATTGGTAACATCCAGGTATTCTTACACGCAGTAATGGCGAAAAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAACTTCCGTCCCATTTAAGACAGAGAGTTCGCCAGTTTGAACGCCAGAAATGGGCAGCCATGGGAGGAGAGGACGAAATGGAATTGGTCAAAGACTTTCCTGAAGGATTGAGGAGAGACATCAAGCGTTATCTTTGCTTAGACCTCATCAGAAAGGTACCTCTGTTTCACAACTTGGATGATCTTATCCTTGACAACATCTGTGATAGGGTTAAACCCCTAGTCTTCTCTAAAGATGAAAAGATAATCAGGGAAGGGGACCCAGTGCCAAGAATGGTATTCATAGTTCGCGGGCGCATAAAACGCATGCAAAGCCTAAGCAAAGGCATGGTGGCCACAAGCGTCATCGAAGCTGGGGGATTTTTGGGGGATGAACTTCTCTCCTGGTGCCTTCGCCGGCCGTTCCTTGACCGACTTCCGGCATCATCCGCCACGTTCTTATGCCTGGAATCAGCAGAAGCTTTTGGGTTGGAGGCAGGTCACCTCAAGTACGTGACGGACCACTTCAGGTACAAGTTTGCCAACGAGAGGCTGAAGAGAACGGCGAGATATTACTCGTCCAATTGGAGAACGTGGGCTGCCGTGAACATACAGCTTGCATGGCGGCGATACAGGCAGAGGACAAGAGGTCCGGTGACCTCTGTGATCGAAGGTGGAGGACGCATCAGTACTGAACGCAGGCTTTTGCAGTATGCTGCTCTGTTCATGTCAATAAGGCCACATGACCACCTTGAATGA 2136 0.5126 MPALFSLPRCLGTYSRSSSGGGDSGLDVVVFDDTTTSPNANSSSVECYACTQVGVPVFHSTSCDSYHPPQWEASAGSSLVPIQNKTTAKNNPRQRPKSGLFGSVLDPRSKRVQRWNRALLLARGLALAVDPLFFYALSIGRDGTPCLYMDGGLATILTVVKTLVDVVHVFHVWLQFRLAYVSKESMVVGCGKLVWDARAIAAHYLRSFRGFWFDAFVILPVPQAVFWLVLPKLIREEQIKIIMTLMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYLIASHVAGGCWYVLAIQRVAACLRQQCERGYGCDLPLSCSDEVCYKFLSPTGTEGTSCNGNFTTVVARKPLCLDAQGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSHLRQRVRQFERQKWAAMGGEDEMELVKDFPEGLRRDIKRYLCLDLIRKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIKRMQSLSKGMVATSVIEAGGFLGDELLSWCLRRPFLDRLPASSATFLCLESAEAFGLEAGHLKYVTDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWRRYRQRTRGPVTSVIEGGGRISTERRLLQYAALFMSIRPHDHLE 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1659 711 Gene3D - 144 444 - -
Alju03g1659 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 92 674 - -
Alju03g1659 711 CDD CAP_ED 521 628 IPR000595 -
Alju03g1659 711 Gene3D Helix hairpin bin 447 512 - -
Alju03g1659 711 Pfam Ion transport protein 115 439 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju03g1659 711 Gene3D Jelly Rolls 519 637 IPR014710 -
Alju03g1659 711 SUPERFAMILY cAMP-binding domain-like 448 634 IPR018490 -
Alju03g1659 711 ProSiteProfiles cAMP/cGMP binding motif profile. 521 600 IPR000595 -
Alju03g1659 711 SUPERFAMILY Voltage-gated potassium channels 106 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1659 Alju-ChrAlju03 44919914 44923607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1659 43 711 Ion Channels AT5G15410 77.025 0.0 1036