Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1643 ATGGGGACGGAGGTGGGTGAGAAAATAAAGTGGGAGGCGATAAGATCTATGAGGACACATTTAAAACCTAGGGCTGGAAGGAAGGGCGCTAGCCGACGCGAGCTTCATCGTTTTGAGCATAGGAGCTGCTTCTCGTTTGCCCCCTGTGATTTAGTCATGGCAACTGCCAGAACCGTGAAGGACGTTTCACCGCATGAGTTCGTCAAGGCTTACTCCGCTCATCTCAAGCGCTCTGGCAAGATGGAGCTTCCTGAGTGGATGGATTTAGTAAAAACTGCAAGATTTAAAGAACTTGCCCCTTATGATCCTGACTGGTATTATGTTAGAGCTGCCTCCATGGCAAGAAAGATCTACTTGAGAGGTGGTCTCGGTGTCGGTGCCTTCCAAAGAATTTACGGTGGAAGCAAGAGGAATGGAAGTCGCCCCCCACATTTCTGCAAGAGCAGTGGAGCCATTGCCAGACACATTCTTCAGCAGTTGCAAAACATGAACATTATTGAGCTTGATCCAAAAGGGGGTAGGAAAATCACTTCAAGTGGTCGAAGGGATCTTGACCAAGTTGCTGGGCGAATTGTGGTTGCTCCATGA 588 0.4881 MGTEVGEKIKWEAIRSMRTHLKPRAGRKGASRRELHRFEHRSCFSFAPCDLVMATARTVKDVSPHEFVKAYSAHLKRSGKMELPEWMDLVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIELDPKGGRKITSSGRRDLDQVAGRIVVAP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1643 195 ProSitePatterns Ribosomal protein S19e signature. 142 161 IPR018277 GO:0003735|GO:0005840|GO:0006412
Alju03g1643 195 PANTHER 40S RIBOSOMAL PROTEIN S19 52 191 IPR001266 GO:0003735|GO:0005840|GO:0006412
Alju03g1643 195 FunFam 40S ribosomal protein S19 54 195 - -
Alju03g1643 195 Gene3D - 43 194 IPR036388 -
Alju03g1643 195 Pfam Ribosomal protein S19e 58 192 IPR001266 GO:0003735|GO:0005840|GO:0006412
Alju03g1643 195 SMART Ribosomal_S19e_2 58 194 IPR001266 GO:0003735|GO:0005840|GO:0006412
Alju03g1643 195 SUPERFAMILY "Winged helix" DNA-binding domain 58 193 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1643 Alju-ChrAlju03 44802796 44806144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1643 53 194 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 84.507 2.87e-91 261