Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1632 ATGGCATTCATCAACAAGATTGGAAAGCTTCTCAAGCATTCTGCGGTCAAATGCATTAGCCCAGAATTTTCTGCATATACTCCATCAATTTTCCAGGCAATCAGGTCCATGTCATCTGCAAAGCTTTTTATTGGAGGTGTTTCATTTAGCACAGACGATATGAGTCTGAGAGAAGCCTTTGCTCGCTATGGAGAGATAATTGATGCAAGGATTATTTTGGATCGTGAGACTGGAAGGTCCAGAGGTTTTGGGTTTATAACTTTTGCATCAAGTGAGGAGGCATCTGCTGCTATTCAGGCAATGGATGGTCAGGATCTTCATGGTCGGAGGATACGGGTAAACTATGCAATGGATAGGGCACGTCCAGGCTTCGGTGGTGGTGGTGGTGGTGGCGGTTATGGTGGTGGCGGTTATGGTGGGGGCTATGGTAGAAGTAACTATGGAGGTGGTGATAACTTTAGGAGTCCAAGTTATGGAAGCGGTGGTGATGGTTTTGGGAGCAGTGAGAATTATGGTGCTCCTGATGGTGCTGGGGGTAGTAACTATCAATTCAGTCAAAACTCGGGTGGAGGAGACCTTGGCTTTGAACCAAGAGGGGATTCAAGTATGGGAGATGATGTTGGCCAATTCGGTGGCAACCAAAATGAAGGAACTGGCTTAGACGATGAAGATGATTTGAAAGAAAACAATGATGAAGACAACTTGAGAGAGAACCGGTAG 720 0.4583 MAFINKIGKLLKHSAVKCISPEFSAYTPSIFQAIRSMSSAKLFIGGVSFSTDDMSLREAFARYGEIIDARIILDRETGRSRGFGFITFASSEEASAAIQAMDGQDLHGRRIRVNYAMDRARPGFGGGGGGGGYGGGGYGGGYGRSNYGGGDNFRSPSYGSGGDGFGSSENYGAPDGAGGSNYQFSQNSGGGDLGFEPRGDSSMGDDVGQFGGNQNEGTGLDDEDDLKENNDEDNLRENR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1632 239 FunFam Glycine-rich RNA-binding protein 3, mitochondrial 12 142 - -
Alju03g1632 239 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Alju03g1632 239 Gene3D - 32 211 IPR012677 -
Alju03g1632 239 SMART rrm1_1 41 114 IPR000504 GO:0003723
Alju03g1632 239 MobiDBLite consensus disorder prediction 158 239 - -
Alju03g1632 239 SUPERFAMILY RNA-binding domain, RBD 25 150 IPR035979 GO:0003676
Alju03g1632 239 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Alju03g1632 239 CDD RRM2_NsCP33_like 41 116 - -
Alju03g1632 239 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 37 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1632 Alju-ChrAlju03 44729680 44731268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1632 39 117 Eukaryotic Initiation Factors Gene Family AT1G49760 32.911 2.97e-11 60.8