Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1628 ATGAAGCAAAAACAGATCTTTCTTCATTTGGCGCTCATCATCTGCTACTTCATGGTGGTGCTCATCAGAGCAAGTAGTGGCATGGAAGTTGCAGAAGAAGAAGAAGAAGCTCATAGGATCGTGGAACTTCCTGGGCAACCAAAAGTGTCTTTCCAACAATTCTCAGGCTATGTCACTGTCAATCACGTTGCTGGTAGAGCCCTCTTTTACTGGCTCACTGAATCCCCACAATACCCCTTCTCCAAGCCCCTCGTCATTTGGCTCAATGGAGGTCCTGGTTGTTCATCGGTGGCGTACGGAGCATCCGAGGAGATAGGCCCGTTCAGAATCAATAGGACTGCTTCGGGACTGTACCTTAACAAGTTCTCTTGGAACTCCGTCGCCAACCTCCTCTTCTTGGAGGCTCCGGCCGGCGTCGGCTTCTCCTACTCCAACCGCTCCTCTGATCTCTACGACACCGGCGACCACCGCACCGCGAAGGACTCTCTGGAATTCATAATAAGGTGGCTAGAACGATTCCCAAGGTACAAGAATCGGGAACTTTATATCAGTGGAGAGAGCTACGCAGGCCATTATGTTCCACAATTAGCCAGAGAAATCATCACGTATAATGCAAAAGCCAAGCACCCAATCAATATCAAAGGAATTTTGGTTGGGAATGCAGTGACGGACAATTACTATGATAACCTGGGGACGGTGACGTACTGGTGGAGCCACGCTATGATCTCCGACCAGACTTACCGGCAGCTCGTGAGCACGTGCGATTTCCACCGGCAAAAGGAATCCGATCAGTGTGAGTCCTTGTATAGCTACGCCATGGACCAAGAATTCGGTAACATTGATCAGTATAACATCTATGCTCCTCCGTGCAACAACTCTGACGGCAGCTCCGCCACCACCCGCCGCTCCATGCGCCTGCCCCACCGTCCCCATCATCCGATGTTAAGGCAAATGTCTGGGTATGATCCCTGCACAGAGAAGTATGCTGAGATATACTACAATAGGCCAGATGTTCAGAAAGCACTCCATGCCAACACAACGGCCATTCCTTACAAGTGGACTGCTTGCAGTGAGGTTCTGAATCGAAACTGGAACGATACAGATGTGTCCATACTTCCCATTTACAGGGAGTTGATAGCACATGGAACCAGAGTCTGGGTTTTCAGTGGGGATGTTGATTCGGTTGTGCCAGTTACAGCAACTAGATATTCCCTTGCACAGCTCAAGTTGGCGACCAAGATTCCTTGGTATCCTTGGTACGTCAAAAAGCAGGTTGGAGGGTGGACAGAGGTATATGAAGGGCTTACGTTTGCAACAGTAAGAGGGGCGGGTCATGAAGTGCCACTGTTCAAGCCCAGAGCTGCCCTCCAGTTATTCAAATCATTCATTGCAGGCAAACCTCTTCCCAAGTCCTAG 1416 0.4986 MKQKQIFLHLALIICYFMVVLIRASSGMEVAEEEEEAHRIVELPGQPKVSFQQFSGYVTVNHVAGRALFYWLTESPQYPFSKPLVIWLNGGPGCSSVAYGASEEIGPFRINRTASGLYLNKFSWNSVANLLFLEAPAGVGFSYSNRSSDLYDTGDHRTAKDSLEFIIRWLERFPRYKNRELYISGESYAGHYVPQLAREIITYNAKAKHPINIKGILVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLVSTCDFHRQKESDQCESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSATTRRSMRLPHRPHHPMLRQMSGYDPCTEKYAEIYYNRPDVQKALHANTTAIPYKWTACSEVLNRNWNDTDVSILPIYRELIAHGTRVWVFSGDVDSVVPVTATRYSLAQLKLATKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFIAGKPLPKS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1628 471 Pfam Serine carboxypeptidase 45 464 IPR001563 GO:0004185|GO:0006508
Alju03g1628 471 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Alju03g1628 471 Gene3D - 324 361 - -
Alju03g1628 471 FunFam Carboxypeptidase 371 465 - -
Alju03g1628 471 ProSitePatterns Serine carboxypeptidases, histidine active site. 435 452 IPR033124 GO:0004185
Alju03g1628 471 Gene3D alpha/beta hydrolase 34 292 IPR029058 -
Alju03g1628 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Alju03g1628 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Alju03g1628 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Alju03g1628 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Alju03g1628 471 SUPERFAMILY alpha/beta-Hydrolases 42 469 IPR029058 -
Alju03g1628 471 FunFam Carboxypeptidase 320 468 - -
Alju03g1628 471 FunFam Carboxypeptidase 34 292 - -
Alju03g1628 471 Gene3D - 371 465 - -
Alju03g1628 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 452 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1628 Alju-ChrAlju03 44702150 44706460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1628 329 468 Calmodulin-binding Proteins AT2G22960 31.206 7.57e-16 73.9