LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g1607	ATGAAACTTATCATCTCAGCTCTCTGTGTTCTGGTGCTTTTCTCTTTTTCAGCTGCTTATGATCCTCTGGATCCAAATGGCAACATAACAATCAAATGGGATGTCATGTCTTGGACCCCAGATGGCTATGTTGCTGTGGTGACACTTCACAATTTCCAAATGTTTCGGCACATCATGAATCCCGGGTGGACACTAGGATGGACATGGGCTAAGAAAGAGGTGATATGGTCCATGGTAGGGGCTCAAACCACAGAACAAGGAGACTGCTCAAAGTTTAAGGGCAATGTGCCTCATTGTTGCAAGAAAACTCCCACAGTGGTGGACTTACTTCCCGGTGTGCCTTACAACCAGCAATTCACAAACTGTTGTAAAGGTGGAGTTGTGGCTGCATGGGGACAAGATCCTTCAGCATCTATCTCTTCCTTCCAAGTAAGTGTTGGACAAGCGGGTACTTCAAACAAAACAGTTAAACTCCCCAAGAATTTCACTCTCTTGGCTCCGGGACCGGGCTATACTTGTGGCCCTGCCAAAATTGTCCCTTCCACCAATTTCCTTACGCCTGACAAGCGCAGGAAGACTCAGGCACTGATGACATGGAATGTAACCTGCACTTACTCACAATTTTTGGCAAGAAAGAACCCAAGTTGTTGTGTCTCGTTGTCATCCTTCTACAATGATACCATCACTGCCTGCCCCTCTTGTGCATGTGGCTGCCAGAACAAGAAAAACTGTGTAAAGAGTGACTCTAAAATTCTTAGCATGGTGGGAGTACACACGCATAAGAAAGATGATGAACCACTGCTACAGTGTACTCATCACATGTGCCCAATCAGAGTACATTGGCATGTGAAGATCAACTATAAGGACTATTGGCGAGTAAAGATTGCCATAACAAATTTCAATTACAGGATGAACTACTCCCTTTGGACCCTTGCAATTCAGCATCCAAATCTTAACAATATCACCCAAGTTTTCAGTTTTAATTACAAGCCTCTGGTAGCATACGAGTCCATAAATGATACTGGTATGTTTTATGGCATGAAGTACTACAATGATCTACTTATGGAGGCCGGACCAGCCGGCAATGTTCAGTCAGAGGTACTTATGCAGAAGGACAAAGATACTTTCACCTTGAAGCAGGGTTGGGCATTTCCTCGTAAGGTCTATTTTAATGGAGATGAATGCATGCTGCCTCCACCTGATAAATACCCGTTTCTCCCAAATTATGCTCCTGTAACTATGCTCAACTTCCCAGCTTTCATCTTATCATTGCTTTTCCTGTTAGTTGTTTGGTGA	1296	0.4398	MKLIISALCVLVLFSFSAAYDPLDPNGNITIKWDVMSWTPDGYVAVVTLHNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSASISSFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTNFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNDTITACPSCACGCQNKKNCVKSDSKILSMVGVHTHKKDDEPLLQCTHHMCPIRVHWHVKINYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNITQVFSFNYKPLVAYESINDTGMFYGMKYYNDLLMEAGPAGNVQSEVLMQKDKDTFTLKQGWAFPRKVYFNGDECMLPPPDKYPFLPNYAPVTMLNFPAFILSLLFLLVVW	431

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g1607	431	Pfam	COBRA-like protein	43	206	IPR006918	GO:0010215\|GO:0016020
	Alju03g1607	431	PIRSF	COBRA	1	431	IPR006918	GO:0010215\|GO:0016020
	Alju03g1607	431	PANTHER	PROTEIN COBRA	7	422	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g1607	Alju-ChrAlju03	44548270	44550041	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g1607	1	430	COBRA Gene Family	AT3G29810	64.706	0.0	615