Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1603 ATGGTAGCTACGGTGATGACGGGTTCAGAGAAAGCGTGGAAGAAAGGACCTTGGACTCTTGAAGAGGATAAGCTGCTCAGTGAATATGTGAGCTTGCATGGTGAAGGAAGATGGAGTTCAGTGGCCAAGTTTACAGGGTTAAATAGGAGTGGGAAAAGTTGCAGGTTGAGGTGGGTGAATTATTTGAAGCCAGGCCTGAAGAAAGGTCACTTAACACCTCAAGAAGAAGCCATCATATTTGAAATCCATGCTATGCTCGGTAACAAGTGGTCTACAATTGCAAAATATTTGCCAGGGAGAACAGACAATGAGATTAAGAACTACTGGAGGACCCACTTCAAGAAGAAAGACAAATCCTCGCGTATTAGTAAGAGGCAAGAAAAGAGAAGATCAAGAATTATTCTAAAACAGATGAAACAACAAGAGAAGCAGCAGCAACCTCAACAGTACTGTGATGTGCAAAGCAGCATGTTGTCGTCTCATGCAGAGTCAAACAATCAAATTACAAGCAACGTTTCTGTTGGGACTAATGTTCTGGAAGACAGCTACCACCCAGTGGCTACCACCATGGAATTAGAGCAATATAATTACTTGCCTTTCATGTACCAAGATTATTTTCCATCCCCGTGGCCTGAAACTACTGTAGAACAAGATGAAGGCTTGTGGGTTACGTTATGGAACCTCGACGAAGAAACAGTACAAGGTCATGGCGGAGACAATAAGTTCAACGAAAATAATGCCATTCATAACCAGCTTACAACAACTTGTTTCGATGATATTTCCAACAACCTCCGCTTTGCAAAATACATGTCCGGCTGA 819 0.4249 MVATVMTGSEKAWKKGPWTLEEDKLLSEYVSLHGEGRWSSVAKFTGLNRSGKSCRLRWVNYLKPGLKKGHLTPQEEAIIFEIHAMLGNKWSTIAKYLPGRTDNEIKNYWRTHFKKKDKSSRISKRQEKRRSRIILKQMKQQEKQQQPQQYCDVQSSMLSSHAESNNQITSNVSVGTNVLEDSYHPVATTMELEQYNYLPFMYQDYFPSPWPETTVEQDEGLWVTLWNLDEETVQGHGGDNKFNENNAIHNQLTTTCFDDISNNLRFAKYMSG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1603 272 Gene3D - 14 67 - -
Alju03g1603 272 SMART sant 67 115 IPR001005 -
Alju03g1603 272 SMART sant 14 64 IPR001005 -
Alju03g1603 272 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Alju03g1603 272 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Alju03g1603 272 FunFam Myb transcription factor 15 67 - -
Alju03g1603 272 CDD SANT 72 113 IPR001005 -
Alju03g1603 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Alju03g1603 272 Gene3D - 70 150 - -
Alju03g1603 272 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 10 176 IPR044676 GO:0003700|GO:0006355|GO:0043565
Alju03g1603 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Alju03g1603 272 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Alju03g1603 272 CDD SANT 17 62 IPR001005 -
Alju03g1603 272 Pfam Myb-like DNA-binding domain 71 112 IPR001005 -
Alju03g1603 272 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1603 Alju-ChrAlju03 44480819 44481848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1603 14 238 MYB Transcription Factor Family AT3G30210 51.965 2.30e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju03g1603 Myb_DNA-binding 2.4e-17 CL0123