Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1584 ATGCAAAGCCATGTTTTTGGGCCAAGGAAGCAGGAAGATATGGAACTTCTAGTTCTAGATATGGCTCCCCCGTTTTTCTGCTCCTTTTTTTTCCAATCAAGTGATGAATATTTCTCTACTTTTTTTCGTTTTATAGACTCCTCTGGTGTGCTACGTTCTTCAAACAATCTTCTCAAGAATGTAGGATCCTGCCAAGTTGCGTTTCAGTCTTTTCCGAATATCTGTTCACCCATGGCTAATAACTCTCAACTTCCGTCCCTCTTTTCCCTCGAAGATGAATTTGAAGAATCAGGCCCTGATGAACAGATATCTGATCTCCCATCACCCACTGCCCACGATCATTGGTGCACCGACTCCTCCAACCCCTTTGCTACCGTGTCCTTCGACCATTTGAGCAACCATTCAAACTGGTATTCTGATTCGGACTCCGATTCGGTGAGTTGCTTTGTTACAGATCTTTTTGAAAATCGCTCGTCGGAGAAATTTTATCGTCGCTGTAACGATAGTTCTGATATCAATCCGTTTTCGGCCGTTCCTGGCCATGGTCACGATGGAGAAGGGTCAAGTTATGCGGAGACGGAATTAGGGTCTGGATTTGGAACCAAAAAAAATGTTGAGACTTCTGCAGCAGGCGAGACATCGAGTTCTGAAAGGGTTCGTTCGCGCACGGATGGTCTTCGAATTGTCGGGTTTAGTTCTGAGTCGGATTCAAATACTGACGAAGAGCTTGATAGGGCTATAGAATTCAGTTCTGGTGAAATTGATGGCAATAGAGTCAGTGGCTTTGACGATTCTGATGTCCACTTTTGTTGGGACAGCCTTTGCTTGGATGATCAAAGGACTCTCAACGAAGATTTTGAGTGGGAGGATTTAGAGGAAAGAGTCAATGATGGAGAAGACTTGAGCGTGGTGATTGGCGAGGTTGATGATCAATCTGTAGCATCTGGATTTTCATATGGAGAAGAGTCGGGTGAAGAGGCATTGAGATACCTTGAATGGGAAATTCTGTTGGCGGTCAACAATTTAGAGAGGAATTCAAGCTTGGATCATGGCGCCACTGCAGGTTCCTTCCTAACGGTTCAGGATGATGGTTATATGAATACAGCTGAGTATGATATATTTTTTGGGCAATTCATGGAAAATGAGAGTTCCGTAAAGGGTAGTCCTCCTACCGCTAGAAGTGTTATGGAGAATCTTCCTTTAGTAGAATTGACAGAGGAGGACTTGGTGGGGGAGAATGTAGCTTGTGCTGTTTGCAAAGATGAAATCATATGGAAGGAAAAAGTGAGAAGGCTTCCCTGCTCACACTTTTACCATGGGGACTGCATTATGCCATGGTTGAGCATCCGTAATACATGCCCTGTTTGTCGGTTTGAGCTGCCCACAGATGATCCTGATTATGAGCAGAGGAAGAATCAGAGAACTGCTCATGAACCTGCTCAAGATCTTTTTGAGTTTGCACTGTAG 1467 0.4431 MQSHVFGPRKQEDMELLVLDMAPPFFCSFFFQSSDEYFSTFFRFIDSSGVLRSSNNLLKNVGSCQVAFQSFPNICSPMANNSQLPSLFSLEDEFEESGPDEQISDLPSPTAHDHWCTDSSNPFATVSFDHLSNHSNWYSDSDSDSVSCFVTDLFENRSSEKFYRRCNDSSDINPFSAVPGHGHDGEGSSYAETELGSGFGTKKNVETSAAGETSSSERVRSRTDGLRIVGFSSESDSNTDEELDRAIEFSSGEIDGNRVSGFDDSDVHFCWDSLCLDDQRTLNEDFEWEDLEERVNDGEDLSVVIGEVDDQSVASGFSYGEESGEEALRYLEWEILLAVNNLERNSSLDHGATAGSFLTVQDDGYMNTAEYDIFFGQFMENESSVKGSPPTARSVMENLPLVELTEEDLVGENVACAVCKDEIIWKEKVRRLPCSHFYHGDCIMPWLSIRNTCPVCRFELPTDDPDYEQRKNQRTAHEPAQDLFEFAL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1584 488 FunFam E3 ubiquitin-protein ligase RING1-like 377 463 - -
Alju03g1584 488 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 281 461 - -
Alju03g1584 488 MobiDBLite consensus disorder prediction 175 219 - -
Alju03g1584 488 SUPERFAMILY RING/U-box 396 464 - -
Alju03g1584 488 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 376 463 IPR013083 -
Alju03g1584 488 SMART ring_2 416 456 IPR001841 -
Alju03g1584 488 MobiDBLite consensus disorder prediction 200 216 - -
Alju03g1584 488 ProSiteProfiles Zinc finger RING-type profile. 416 457 IPR001841 -
Alju03g1584 488 Pfam Ring finger domain 416 457 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1584 Alju-ChrAlju03 44330978 44333288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1584 225 471 C3H Transcription Factor Family AT3G02340 38.491 2.51e-43 156