Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1575 ATGGGGAAACTAAGAGAAGCTGTTCTTTGTTTTGCGGTACTACTTTGGTTATGGGGTTCTGCAAATGCTGTTCTTTCTCCTAAAGGAGTGAACTTTGAAGTGCAAGCTTTAATGGGCATTAAAGCTTCTCTGCGGGATCCTCATGGTGTCTTAGATAATTGGGATGCGGATGCAGTTGATCCTTGTAGCTGGACTATGGTCACCTGTTCGCCGGACAACTTTGTCATTGGCCTGGGTACTCCCAGTCAAAGTCTATCAGGTACTCTGTCTCCAAGCATAGGCAACCTAACGAACCTTCAGATTGTGTTGCTACAGAATAATAATATAACAGGTCTAATACCTTCAGAGCTGGGCAGGCTTTCAAATCTTCATACACTTGATCTGTCTAATAACTTATTTAATGGGGAAATTCCTCCCTCTCTCGGTCACTTGAGAAGCCTCCAATACTTGAGGCTCAACGATAACAGTCTTTCTGGAGAATGTCCAGAGCCACTGGCTAACATGACACAGCTTGCTTTTCTTGACTTGTCCTATAACAACCTCAGTGGCCCTATGCCCAGAATTTTGGCCAAATCATTCAACATTGTCGGAAACTCTCTCGTCTGTGGTATGGGGAAAGAGACAAAATGCCATGGCATGACGACATTGATGCCCATGTCCATGAACTTGAACACTACAGAGGATGCTATACCATCAGGCAAAACAAAATCACACAAAATGGCCATTGCCTTTGGCTTAAGTCTAGGATGCCTCTGCTTGATAGTTCTTGGTTTTGGGCTATTTCTATGGTGGAGGCACAAGCGTAACCAACAGACATTTTTTGATGTCAAAGACCGGTATCATGAAGAAGTGTACCTTGGAAACCTGAAGAGATTCCAATTCAGAGAACTCCAGATAGCTACACACAACTTCAGCAACAAGAACATTCTGGGAAAGGGTGGCTTTGGAAATGTGTACAAAGGAGTGCTCTCAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGACGGCAATGCCATAAGAGGAGAGATCCAATTTCAGACTGAAGTTGAAATGATTAGCTTGGCAGTGCACCGAAACCTCCTCAGACTCTACGGATTCTGCATGACACCAACCGAAAGGCTTCTGGTTTACCCTTACATGTCTAATGGCAGTGTTGCTTCCCGTCTCAAGGCTAAACCAGTGATAGACTGGGGCACTAGGAAGCAAATTGCCTTAGGGGCAGCCAGGGGACTATTATACCTTCATGAGCAGTGTGATCCAAAGATAATTCATAGGGATGTGAAAGCTGCAAACATTTTGCTTGATGACTATTGTGAGGCTGTGGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCATCAAGATTCACATGTTACTACCGCAGTGAGAGGCACTGTAGGGCATATTGCCCCAGAGTATCTCTCCACAGGGCAATCCTCTGAGAAAACTGATGTCTTCGGATTTGGCATTCTCCTCCTTGAACTGATCACAGGCCAGAGGGCTCTAGAATTTGGAAAGGCTGCAAACCAGAAAGGAGCCATGCTAGATTGGGTGAAGAAAATTCATCAGGAGAAGAAGTTAGAGCTGTTCGTGGACAAGGATCTGAAGAACAACTATGATAGGATTGAGCTGGAGGAAATGGTTCAAGTGGCTCTCTTGTGTACTCAGTACCTTCCTGGTCTGAGGCCAAAAATGTCAGAAGTAGTAAGGATGCTTGAAGGAGATGGATTGGCAGAAAGATGGGAAGCTTCTCAGAGAGCTGATATGAGCAAGTGCAAGGCTCCTGAGTTGTCTTCATCTGATAGATATTCTGATCTCACTGATGACTCTTCCATGCAAGTCCAGGCCATGGAACTTTCGGGCCCGAGGTGA 1875 0.4507 MGKLREAVLCFAVLLWLWGSANAVLSPKGVNFEVQALMGIKASLRDPHGVLDNWDADAVDPCSWTMVTCSPDNFVIGLGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNITGLIPSELGRLSNLHTLDLSNNLFNGEIPPSLGHLRSLQYLRLNDNSLSGECPEPLANMTQLAFLDLSYNNLSGPMPRILAKSFNIVGNSLVCGMGKETKCHGMTTLMPMSMNLNTTEDAIPSGKTKSHKMAIAFGLSLGCLCLIVLGFGLFLWWRHKRNQQTFFDVKDRYHEEVYLGNLKRFQFRELQIATHNFSNKNILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAIRGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKAKPVIDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLELFVDKDLKNNYDRIELEEMVQVALLCTQYLPGLRPKMSEVVRMLEGDGLAERWEASQRADMSKCKAPELSSSDRYSDLTDDSSMQVQAMELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1575 624 FunFam Somatic embryogenesis receptor-like kinase 1 381 593 - -
Alju03g1575 624 FunFam Putative LRR receptor-like serine/threonine-protein kinase 30 212 - -
Alju03g1575 624 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Alju03g1575 624 SUPERFAMILY Protein kinase-like (PK-like) 280 574 IPR011009 -
Alju03g1575 624 SMART serkin_6 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1575 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Alju03g1575 624 MobiDBLite consensus disorder prediction 586 624 - -
Alju03g1575 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 584 - -
Alju03g1575 624 SUPERFAMILY L domain-like 33 195 - -
Alju03g1575 624 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Alju03g1575 624 FunFam Somatic embryogenesis receptor kinase 1 273 380 - -
Alju03g1575 624 Pfam Protein kinase domain 305 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1575 624 MobiDBLite consensus disorder prediction 601 618 - -
Alju03g1575 624 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Alju03g1575 624 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Alju03g1575 624 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Alju03g1575 624 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Alju03g1575 624 ProSiteProfiles Protein kinase domain profile. 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1575 Alju-ChrAlju03 44262134 44265042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1575 1 624 Receptor kinase-like Gene Family AT5G16000 78.006 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju03g1575 Pkinase 9.4e-45 CL0016