Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1570 ATGAGAGCTGATCTGATGCTTGAGTTAGCTAGTTTCTCAGCTAGACTCCACGAGATATATTCGGAGGTCAGAAAGAAAACCTATGCTCAGTGCAGAAGAGCTGAGGCCGAGGCTCTGAGACCTATTCAGTGTTTTGCCTTTGAAAGTATTTCTGCAAACTGCGAAAAGCTTAAACGAAGGCCTCCTGACTTGGACGGTGATATATCGGAGCACTCAAGAAAAAAGAAGTGTACAGGGAAACAGAAGGGAAATAAGGTTCAAGCTGGAAAAAGGCATGATTGTGGTATGGAGGAGGATGCGATTCCAGCACAAGCGTGTAAATTCACAAGAGTCGGAAATGGCAGAAACGACTCCAGCAAGATAGGTTCTAGAGGGGGCGGCGGCGACGTCAGCTCGAATCGGTTCCAGAGCTGGCACCACCATTCTTCGAGAATCATTAGGGTTTCTCGAGCATCTGGAGGGAAAGACAGGCACAGCAAGGTGATGACTTCAAAGGGTTTAAGAGACCGAAGGGTTAGGCTGTCGGTAACCACAGCAATCCAGTTCTATGATCTTCAAGATCGGCTTGGCTATGACCAACCCAGTAAAGCTGTGGAGTGGCTAATCAAAGCAGCTTCTGACGCCATTTCTGAGCTTCCCTCTCTCAACAACACATTCCCTGATAAGCAGCCCAGCGATGAGAAAAGAGGAACAGAACAAGGGTTTGATGATACAGCTGATCATGCTGAGGTAAATGCCGATGAGGGTGATTATCACCAGACTCAAAGTCAGAACCTTTCTTTGTCTAAGTCTGCTTGCAGCAGCACTTCTGAGACAAGCAAAGGCTCTGGTTTGACCCTCTCAAGGTCTGAGATTCGAGTGAACCGTGTGAAGGCCAGAGAGAGGGCAAGAGAGAGAGCAGCAAAAGAGAAGGAACAAGAAAACACTGCCCATCCCCACAATAATGTGAATAACCCCATTTCTCAAACTGCTTCTTTCACTGAGCTTCTCACCGGCGGGGTTACTAGTACTGTCAATCCTTCCACCAACACGAGTCCGGCCGGCGATGATCATGAGCCTGATTTGTTCAACAAGGCACCGAGACAGCAATGGTGTACAACAACACCCCTGGACTACTTTAACTCAGGCCTTGTGGGGAATCATCACTCTATTAGAACTCATAATAATAATAATCAATCTTCGGGGTTATTCTCAGGACAAATCCAACTGGGAAACTCTAATCCCCTTCCTCTTCAGGCACTGTCTGTTTCTCCATTCAATGTGGGGAGTGAAAATCACTCAGATCAGCTCCAGCATTTCTCATTATCCAACATGCCTGACCATCATCTCTTACCCAGCGGAAGCTGCAGCGACTACAACCTCAACTTCACCATCTCTTCTTCTTCTTCTTCTTCTTCAGGCTTTGCTGGTTTCAACAGGGGGACCCTTCAGTCCAATTCACCGTCTGTTTTGCCTCACCCTCTTCAGAGGTTTTCTTCTTCTTTAGACGGATCCAATCTACCTTTCTTCATAGGAGCTGCTGCTGCGCCAACCATGGAGAATCACCACCACCACCACCAGTTCTCATCACTTGGATTTGATGGCCGTTTGCAACTATGTTATGGCGACTTAACCCGCCATTCTGACCACAACAAGGGCAAAGGCAAGAACTGA 1653 0.4749 MRADLMLELASFSARLHEIYSEVRKKTYAQCRRAEAEALRPIQCFAFESISANCEKLKRRPPDLDGDISEHSRKKKCTGKQKGNKVQAGKRHDCGMEEDAIPAQACKFTRVGNGRNDSSKIGSRGGGGDVSSNRFQSWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNNTFPDKQPSDEKRGTEQGFDDTADHAEVNADEGDYHQTQSQNLSLSKSACSSTSETSKGSGLTLSRSEIRVNRVKARERARERAAKEKEQENTAHPHNNVNNPISQTASFTELLTGGVTSTVNPSTNTSPAGDDHEPDLFNKAPRQQWCTTTPLDYFNSGLVGNHHSIRTHNNNNQSSGLFSGQIQLGNSNPLPLQALSVSPFNVGSENHSDQLQHFSLSNMPDHHLLPSGSCSDYNLNFTISSSSSSSSGFAGFNRGTLQSNSPSVLPHPLQRFSSSLDGSNLPFFIGAAAAPTMENHHHHHQFSSLGFDGRLQLCYGDLTRHSDHNKGKGKN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1570 550 MobiDBLite consensus disorder prediction 65 91 - -
Alju03g1570 550 MobiDBLite consensus disorder prediction 333 348 - -
Alju03g1570 550 MobiDBLite consensus disorder prediction 286 310 - -
Alju03g1570 550 MobiDBLite consensus disorder prediction 116 139 - -
Alju03g1570 550 Pfam TCP family transcription factor 153 306 IPR017887 -
Alju03g1570 550 ProSiteProfiles R domain profile. 286 304 IPR017888 -
Alju03g1570 550 MobiDBLite consensus disorder prediction 116 142 - -
Alju03g1570 550 MobiDBLite consensus disorder prediction 213 235 - -
Alju03g1570 550 MobiDBLite consensus disorder prediction 333 356 - -
Alju03g1570 550 ProSiteProfiles TCP domain profile. 154 212 IPR017887 -
Alju03g1570 550 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 114 477 IPR005333 GO:0003700
Alju03g1570 550 MobiDBLite consensus disorder prediction 250 320 - -
Alju03g1570 550 MobiDBLite consensus disorder prediction 250 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1570 Alju-ChrAlju03 44171368 44173779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1570 133 550 TCP Transcription Factor Family AT4G18390 44.977 1.54e-81 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju03g1570 TCP 1.5e-40 No_clan