Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1564 ATGGATTGCGAGAATTATAAGCTGATTGGTAGGGCCCACATAGGGAACGAAAAGGGTATGAAAATGAAGAACGTGAGAGATATGGAAAAGTGGGGAACTCAAAGGAGGACAGCGACGGACACCAATGTGGGAAAGGCGTGGCGGTTTCGCATGGACTACGGAGGGCGGAATTGCAACTTGGAGCTTCGTCTTTTTCCTTCCTTTGAAATCGGATCGACGGAACAAGATAGTGAGAGCCCACAGCAAAATCTGCAGAAGCTCACCGTTTTCTATGACGGAAAGATGTGTGTTTTCGATGTCACCGAGGTTCAGGCTAGATGGATCTTGATGCTTGCAAATAGAGAGATGAAGGATAGAGCAAGGACACCAAACGGGTCCGGGTCGGAGCCCTCTTCACCAAACACTACAGTGCCATTGTATAGCCCAAATAGTGGTCTTTCTATGAAAAGATCGCTCCAAAGTTTCCTTCAGAAGAGAAAGAATCGAATCCTTGAAGCTTCCCCCTACCATCACTGA 516 0.4729 MDCENYKLIGRAHIGNEKGMKMKNVRDMEKWGTQRRTATDTNVGKAWRFRMDYGGRNCNLELRLFPSFEIGSTEQDSESPQQNLQKLTVFYDGKMCVFDVTEVQARWILMLANREMKDRARTPNGSGSEPSSPNTTVPLYSPNSGLSMKRSLQSFLQKRKNRILEASPYHH 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1564 171 Pfam tify domain 82 113 IPR010399 -
Alju03g1564 171 SMART tify_2 80 114 IPR010399 -
Alju03g1564 171 Pfam Jas motif 149 169 IPR018467 -
Alju03g1564 171 ProSiteProfiles Tify domain profile. 80 114 IPR010399 -
Alju03g1564 171 MobiDBLite consensus disorder prediction 124 145 - -
Alju03g1564 171 MobiDBLite consensus disorder prediction 119 145 - -
Alju03g1564 171 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 57 169 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1564 Alju-ChrAlju03 44084509 44086265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1564 56 170 Tify Gene Family AT1G30135 45.736 1.25e-28 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju03g1564 tify 2.1e-10 No_clan