Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1542 ATGATGGAGCTACCATCAGTAGGATCAAGCCTAACCCCACGACCTCCATTACCACCATTTGTATCGTCTCTGTGTCCTCTTGTACGCGCAGAATTCTCTGCACCTCCATTCCTGATAGCCTCCTGTCTGCCACTTCTTATACCTTGTACACCTATTTTCCTCATTTCCTTTGTTGTTGGTACAAGATGGAAGGTACTCGCGACCATAAGAAAACATAACCGTCTCTACTGTAGCCTAAGGAATTCAAACCCAATGTCACTTTCCTGTGCAAAAAACTTCTTCCAGAGGTTCTGGGTGGATGAATTCCAAATGGGAAGTTTTGCACATAGCAGCTTTCTGTCTAGTGATCTTCTGCCGTCCCTTGGAGCCCGAATCAACCAAGAAACTAGACTTCGAAGATACGTAATCTCCCCTTTCAACTCCTGGTATAGGGCTTGGGAGATGTTACTGATTGTCCTGGTCATCTACTCAGCCTGGATTTGCCCTTTTGAGTTTGCATTTCTTCCTTACAAGCAAGATGCACTATTTATCGTCGACAACACTGTCAATGGCTTCTTTGCCATTGACATAGTCCTGACATTCTTTGTTGCGTATCTGGATAGCCACTCTTACCTTCTTGTAGACGATCACAAGAAAATTGCAGCAAGGTACCTGTCCTCCTGGTTCATTTTCGATGTCTGCTCAACGGCACCATTTCAGTCCATTAGCCTGCTTTTCACTAAACATGGTGGCGAGCTTGGCTTTAAACTGCTTAACATGCTTCGGTTATGGCGTCTGAGACGTGTCAGCTTTCTGTTTGCAAGGCTTGAAAAAGACATCCGCTTCAATTATTTCTGGACTAGGTGCACAAAGCTCATTTCTGTAACCTTGTTTGCAGTGCACTGTGCCGGATGCTTTAATTATTTGCTTGCAGATAGATACCCCGATTCTAAAAGGACCTGGATTGGTGCTGTGTACCCAAATTATAAAGAACTGAGTCTCTGGGACAGATATGTGACTTCAATATATTGGTCCATTGTCACACTTACAACTACAGGCTACGGGGACTTGCATGCTGAAAACACAGGAGAGATGCTGTTCGATATCGTTTACATGTTGTTCAACTTGGGATTAACGTCATATATCATTGGGAACATGACAAACCTTGTAGTCCACTGGACCAGCCGCACCAGAAATTTTAGAGACTCAGTAAGAGCAGCTACAGAATTTTCTTCAAGAAACCATTTGCCCCATCATATACAAGATCAAATGTTGTCGCACTTGTGTTTGAGATTTAAAACGGAAGGATTGAAGCAGCAAGAAGCAATAAATGGTCTGCCTAAGGCGATTCGTTCAAGCATTTCACACCATCTATTTTTTCCCATACTGCAGAAAGTCTACCTCTTCCAAGGAGTCTCTCATGACCTTCTTTTCCAACTGGTTTCAGAAATAGAAGCAGAATATTTCCCACCCAAGGAAGAAGTGATCCTGCAAAACGAGTCTCCAACAGACCTTTATGTACTGGTTTCAGGGGCAGTGGATATTATTCGCTACATTGATGGACGAGATCAAGTTATCGGTAAGGCAATTGGAGGGGATACAGTTGGTGAGATTGGGGTTTTATACTACAGACCACAGCCCTTCACAGTTCGGACCGTGGAGCTATCTCAAATATTAAGACTTAGCAGAAATTCCTTAATGAATGCCATGCAAGCAACTCCAGAAGATACACAAATTATAAGGAACAATCTTTTCATGAAACTTAGGGGACAAGGCCTGGGCTCTGAATATGTCCATGAAATGCTTGGCGGAACAAGAATGGGAGGCTGTACGAAAAATTCAAATGGAAGTTCCAGAATGAAAGAAGGGGAATACAAAGATTTTACAGACTTGGAAGACACTACTCGTGATGCTGCAAAGGACAGTCAGCAAGATATGATTGAAATTTTGCTCCAAAGGGACACAAATACAAAGAGTCTAAATTCCCAGCCACCGACTCCAAAAGTTCCGATAGAACAGCAAGAAAACAAGAGCATTCCTGACCTCTTAATGGGTGGTGAAAATAGGAGAAGATCAGATGAATATAGAATGGATTTGGTGGCTAGGAATGATCTAACCAGAAGCAGAAAACACGATGGTTCCAGGCCCATCGACTTCCCGATAGAAAAAGTCTGCCCAAACTCTTATTCGGGAAATCACAATGTCCCAGGTGATAGAGAAATGGCAAAACGCATTAAAAAAAGAGTTACCATCCACTTGATCTGTGAATACTGTAGTGCTTCACAGGGGCATGGGAAATTGATACTTTTACCTGATTCATTAGAACAGCTGCTCAAGGTTGCTGGTCACAAATTTGAAGGCTGCAAACCTACAAACGTTGTTACTGCAGAAAATGCAGAGATAGATGACATAAGCATCATTCAAGACGGTGATCATCTCTTCCTTCTTTGTATTGATAGAGAACATTTGAATTCATGA 2457 0.4253 MMELPSVGSSLTPRPPLPPFVSSLCPLVRAEFSAPPFLIASCLPLLIPCTPIFLISFVVGTRWKVLATIRKHNRLYCSLRNSNPMSLSCAKNFFQRFWVDEFQMGSFAHSSFLSSDLLPSLGARINQETRLRRYVISPFNSWYRAWEMLLIVLVIYSAWICPFEFAFLPYKQDALFIVDNTVNGFFAIDIVLTFFVAYLDSHSYLLVDDHKKIAARYLSSWFIFDVCSTAPFQSISLLFTKHGGELGFKLLNMLRLWRLRRVSFLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNYLLADRYPDSKRTWIGAVYPNYKELSLWDRYVTSIYWSIVTLTTTGYGDLHAENTGEMLFDIVYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDSVRAATEFSSRNHLPHHIQDQMLSHLCLRFKTEGLKQQEAINGLPKAIRSSISHHLFFPILQKVYLFQGVSHDLLFQLVSEIEAEYFPPKEEVILQNESPTDLYVLVSGAVDIIRYIDGRDQVIGKAIGGDTVGEIGVLYYRPQPFTVRTVELSQILRLSRNSLMNAMQATPEDTQIIRNNLFMKLRGQGLGSEYVHEMLGGTRMGGCTKNSNGSSRMKEGEYKDFTDLEDTTRDAAKDSQQDMIEILLQRDTNTKSLNSQPPTPKVPIEQQENKSIPDLLMGGENRRRSDEYRMDLVARNDLTRSRKHDGSRPIDFPIEKVCPNSYSGNHNVPGDREMAKRIKKRVTIHLICEYCSASQGHGKLILLPDSLEQLLKVAGHKFEGCKPTNVVTAENAEIDDISIIQDGDHLFLLCIDREHLNS 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1542 818 FunFam Potassium channel KAT3 145 385 - -
Alju03g1542 818 Pfam KHA, dimerisation domain of potassium ion channel 740 808 IPR021789 -
Alju03g1542 818 CDD CAP_ED 461 573 IPR000595 -
Alju03g1542 818 PRINTS EAG/ELK/ERG potassium channel family signature 331 348 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g1542 818 PRINTS EAG/ELK/ERG potassium channel family signature 375 384 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g1542 818 PRINTS EAG/ELK/ERG potassium channel family signature 190 199 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g1542 818 PRINTS EAG/ELK/ERG potassium channel family signature 357 368 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g1542 818 PRINTS EAG/ELK/ERG potassium channel family signature 179 189 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju03g1542 818 FunFam Potassium channel KAT2 449 585 - -
Alju03g1542 818 Pfam Ion transport protein 144 390 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju03g1542 818 Gene3D Jelly Rolls 428 585 IPR014710 -
Alju03g1542 818 ProSiteProfiles KHA domain profile. 741 818 IPR021789 -
Alju03g1542 818 Pfam Cyclic nucleotide-binding domain 481 564 IPR000595 -
Alju03g1542 818 ProSiteProfiles cAMP/cGMP binding motif profile. 461 580 IPR000595 -
Alju03g1542 818 Gene3D - 144 384 - -
Alju03g1542 818 SMART cnmp_10 461 578 IPR000595 -
Alju03g1542 818 SUPERFAMILY cAMP-binding domain-like 388 581 IPR018490 -
Alju03g1542 818 PANTHER POTASSIUM CHANNEL AKT1 109 582 IPR045319 GO:0005249|GO:0006813
Alju03g1542 818 SUPERFAMILY Voltage-gated potassium channels 138 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1542 Alju-ChrAlju03 43854982 43859274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1542 85 808 Ion Channels AT5G46240 60.828 0.0 889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1542 03 43854982 43859274 Alju03g1542 03 43854982 43859274 ECH