Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1535 ATGTCGTCGAGGAGAAAGGTTAGAGAGCCAAAGGAGGAGAATGTTACTCTTGGCCCAACTGTAAGAGAGGGTGAACATGCCTTCGGTGTAGCCCATATTTTTGCATCATTTAACGACACCTTCATTCACGTGACTGATTTGTCTGGGAGAGAAACCCTTGTCCGCATCACCGGTGGAATGAAGGTAAAAGCTGACAGAGATGAGTCTTCCCCATACGCTGCTATGCTTGCTGCACAGGATGTAGCTTCTCGATGCAAGGAACTTGGCATCACCGCTCTTCACATCAAGCTCAGGGCCACTGGTGGAAACAAGACAAAAACACCTGGTCCCGGTGCTCAATCTGCACTCCGTGCTCTTGCTCGTTCTGGAATGAAAATTGGTCGTATAGAGGATGTTACTCCAATTCCTTCTGATAGCACTCGCAGAAAGGGTGGTAGAAGAGGTAGAAGGCTTTGA 456 0.4846 MSSRRKVREPKEENVTLGPTVREGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVASRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1535 151 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 1 148 IPR001971 GO:0003735|GO:0005840|GO:0006412
Alju03g1535 151 ProSitePatterns Ribosomal protein S11 signature. 116 138 IPR018102 -
Alju03g1535 151 Pfam Ribosomal protein S11 29 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
Alju03g1535 151 Gene3D Ribosomal protein S11 1 151 IPR036967 GO:0003735|GO:0005840|GO:0006412
Alju03g1535 151 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 4 146 IPR001971 GO:0003735|GO:0005840|GO:0006412
Alju03g1535 151 SUPERFAMILY Translational machinery components 24 149 - -
Alju03g1535 151 FunFam 40S ribosomal protein S14 1 151 - -
Alju03g1535 151 MobiDBLite consensus disorder prediction 131 151 - -
Alju03g1535 151 Hamap 30S ribosomal protein S11 [rpsK]. 4 148 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1535 Alju-ChrAlju03 43805080 43806750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1535 3 140 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 90.580 2.39e-92 263