Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1525 ATGGCTGTATCTACTGGTGGAGGGAATGTGAAGCTGGGCAATGGACAGAGAATGGCAATAGATGCAAATCTAGGAGATGGTGTGGATTGGGGAGGAGATGACTTGGAGGTGGGTGAAGGTGATGTGAAGCTACTAGTCCAGATGGGGGTACATAAGAGCAGTGTTACTGAGTCATTAAATGAAGAACTTGAGGGTGAGGAAGAAGATTTAGTAGATGAAGAAGCTAAGGATGAGGAGGAAGGGTCACTAATTAAAGAACATGAAGGTGAGGAGGAAGAGTTAGGAAATGAACAAGAATTTGAAAGTGATGATAAATATTCAACAAATGAAGAATCTGAACGTGGGGATGAACAAATAACGGATCCTCTTGCTGTAGTCCCTGTGCCTCCGACTCCGGCGCCGTCGTCCTCAAGTGTGCGTGTGAGAATGAGGGCAATGATGTTCTGGAGAAATCTGGAGCAAATTGGACTCACCGTCAAAGAATTACGGGATATGGCATTCTCACTGGTTAAATTCTCCTGTTGTCTTCATGTTACTGCCACCTATCTCGTGGACCCTTCCATTTGCCGTGGTTCTAGCATGATTCCAACAATAGGTCCGATGACTTCCTTTATATTGACTGAAAGGATCTCCCCCCGTTTTGGTAAAGTTCAGCGCGGCGATCTTGTCATTATGCAGTCACCTGAAAACCCTAGAAAATTCTCGTGCAAGCGCTTGCTTGGATTGGAGGGTGATAGTGTCACGTTTCTCGTTGATCCTAAAAACAGTGATAAATGCGAGACTGTAGTGGTTCCCAAGGGACATGTTTGGGTACAGGGAGATAACATATATAATTCTAGGGATTCAAGGCAATTTGGTCCTGTTCCATATGGTCTTCTTCATGCCAAGGTTTTCTGGAGGTTATGGCCACCTGGAGGTTTTGGACCCTGGGCAAAATCTGATTGA 945 0.4508 MAVSTGGGNVKLGNGQRMAIDANLGDGVDWGGDDLEVGEGDVKLLVQMGVHKSSVTESLNEELEGEEEDLVDEEAKDEEEGSLIKEHEGEEEELGNEQEFESDDKYSTNEESERGDEQITDPLAVVPVPPTPAPSSSSVRVRMRAMMFWRNLEQIGLTVKELRDMAFSLVKFSCCLHVTATYLVDPSICRGSSMIPTIGPMTSFILTERISPRFGKVQRGDLVIMQSPENPRKFSCKRLLGLEGDSVTFLVDPKNSDKCETVVVPKGHVWVQGDNIYNSRDSRQFGPVPYGLLHAKVFWRLWPPGGFGPWAKSD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1525 314 Pfam Signal peptidase, peptidase S26 258 302 IPR019533 GO:0004252|GO:0006465
Alju03g1525 314 Pfam Signal peptidase, peptidase S26 165 249 IPR019533 GO:0004252|GO:0006465
Alju03g1525 314 MobiDBLite consensus disorder prediction 100 118 - -
Alju03g1525 314 CDD S26_SPase_I 186 297 IPR019533 GO:0004252|GO:0006465
Alju03g1525 314 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 158 309 - -
Alju03g1525 314 MobiDBLite consensus disorder prediction 53 137 - -
Alju03g1525 314 MobiDBLite consensus disorder prediction 60 77 - -
Alju03g1525 314 PRINTS Bacterial leader peptidase 1 (S26A) family signature 264 283 IPR000223 GO:0006508|GO:0008236|GO:0016020
Alju03g1525 314 PRINTS Bacterial leader peptidase 1 (S26A) family signature 235 247 IPR000223 GO:0006508|GO:0008236|GO:0016020
Alju03g1525 314 PRINTS Bacterial leader peptidase 1 (S26A) family signature 182 198 IPR000223 GO:0006508|GO:0008236|GO:0016020
Alju03g1525 314 SUPERFAMILY LexA/Signal peptidase 181 310 IPR036286 -
Alju03g1525 314 Coils Coil 56 80 - -
Alju03g1525 314 FunFam Inner membrane protease subunit 1 180 309 - -
Alju03g1525 314 Gene3D Umud Fragment, subunit A 180 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1525 Alju-ChrAlju03 43724851 43731071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1525 194 309 MADS-box Gene Family AT1G29960 55.172 3.42e-44 145