Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1524 ATGGCTCCATACCGCGTTTCCTACATCACTCCACTTGCTTCCCTGTTTCCTAATATTTTACTCCCAACTGGAGCCTTCTTTTGCGAAAATCTATTGCAGCTAAGCCTACCCTTTTTTATCATTCCTTCAATACTGATGTCTCCAAAGATCAGTTTGACTATACTCATAGTCTTCTTGCTCATTTCAATTTCAACTACTATACTTTCAAATGCTGAATCAAGCTCACTGGAAAAAGTTGAAATTGAAGCTTTGAAAGCTTTCAAAAGCTCTATAACTCATGACCCAAATGGAGCATTGTCAGATTGGGTTGACACAACCCATCATTGCAACTGGTCTGGCATTGCTTGTGATCCATCTTCACAACATGTTATCTCTATCACTCAGATTGGCCAAAAGCTCCAAGGTAAGATTTCATCAATCCTGGGCAATCTTTCTGGCCTCCAGCTTCTTGACTTGACCTCAAATTCATTTTCTGGGCTCATTCCTCCTCAGCTCAGCTTTTGTTCCCAGCTTTCTCAATTGTATCTTGTTGACAACTCTCTCTCTGGTCCAATCCCACCTGAGCTAGTAAACTTGAAAGGTCTTCAGTATTTGGATTTGGGCAGTAACATTCTAACTGGAAGCCTCCCAGAAAGCTTGTTTAACTGCACCTCTTTGTTGGGTATTGCTTTTAATTCAAACAATCTGACTGGTAAAATCCCTTCAAATATTGGCGACTTGGTTAACGTTACACAAATTGCAGGATTTGCTAATCAGTTTGTTGGGTCTATTCCTCCTTCCATAGGGAAGTTAGAGGCTTTACAGTCTCTAGATTTTAGTCAAAACCAGTTGTCAGGAGAGATACCTAGAGAGATTGGGAATCTAAGAAACTTAGAATATCTTCTCCTATTTGAAAATTCTTTGGTTGGAAAAATCCCATCTGAACTTGGTCAGTGCATGAACCTAGTGAACCTTGAACTATACACAAATAAGTTGTCTGGAAGCATTCCTCTTGAGCTAGGAAACTTAGTTCATTTGAGAACATTAAGGATATATGATAATAACTTCACCTCCACAATTCCTTCTTCCATTTTCCAGCTGAAATCACTAACCAACTTGGGTCTGTCAGAGAATCGGTTAGAGGGAACAATATCTCCTGAAATTGGATCTTTGAGATCGCTTAAAGTTCTAACCCTGCATTTAAATAAGTTTACTGGACAAATACCTTCATCAATTACAACCTTGTCAAACTTAACATATCTCTCAATGAGCCAGAATCTCCTTTCAGGAAAACTTCCTTCCAACATAGGATTGCTTCATAGTTTGAAGATTCTAGTCCTAAATGGAAACCTTTTGCATGGTCATATCCCACCTAGTATCACCAATTGTACTAGTTTGGTGAATGTAAGTTTGTCCTTTAATTCACTAAGTGGGAACATTCCTGAAGGCTTTTCAAGGATATCTAATCTTACTTTTTTATCTCTGGCATCAAACAGCATGTCTGGTGAAATCCCAGATGATCTCTTCAACTGCTCAAATCTTCGAACTCTAAGTTTGGGTAAGAACAATTTCAGTGGGATGCTAAAACCTGCAATCAAAAACCTGTTCAATCTCAGGACCCTTCAGCTGAATTTAAATTCTTTCACAGGGCCTATTCCACTTGAGATGGGGAATTTAAATCAACTTGTGACATTATCACTTTCTGATAATAGATTTTCTGGTAACATTCCTTTAGAGCTATCCAACCTCACTCTTCTTCAGGGTCTCGACTTGCAAGACAATGCATTAGAAGGAACAATACCTAACCAGTTATTTGAACTGAATCAACTAACCGTGCTTCAGCTACATCAGAACAAGCTGGTTGGTCAAATCTCAAAGGCTTTCTCCAAACTTAAGATGCTTTCTCACTTAGACCTCCATGGGAACATGTTCAGTGGATCAATTCCAAGCGAGTTGAGTCAACTCAACCGGCTCTTAATGTTGGATCTGTCACAGAACAACCTGACAGGGTCAATTCCTGGGGATGTCATTGCATCTTTTAGAGACATGCAGCTACATCTCAACTTGTCTCATAACCACTTTATTGGAGCAATTCCGGCAGAGCTGGGTATGATGGAAATGATACAAGCCATTGATGTTTCAAACAACAACCTATCTGGTGTCATTCCCAAGGCACTTTCAGGGTGCAGGAATCTATTTAATCTTGATATTTCAGGAAACAATATCTCAGGTCCTATTCCAGCAGAGGCTTTCAATAACATGGACTTGCTTCAAAGCTTGAACCTTTCAAGGAACCATCTAGATGGAGAAATCCCTGAGACATTGGCAAAGCTTGAGCATCTTATTTCCTTAGATCTTTCGCACAATAACTTGGAGGGATCTATCTCTTATAATTTTGCCAATCTCTCCAACCTAAAGCTTCTCAACCTTTCTTTCAACCAACTTGAAGGTCAAGTTCCATCAAGAGGAATATTCTCACATATAGATGCATCTGCTTTGATGGGAAACCCTGCTCTTTGTGGAACCAAATTTCTGATGCCATGTAGGGAAACAACAAGGAGATCTCATTCACTATCCAAGAAGAGCATATATATTATTGCCTCACTTGGATCTGTTGCTGTCCTCCTAATTTTGGTATTGGTGATTGTGTTTCTCATACAACGCGCCAGATCACGCCGTTCTAAGAAGCTTGAGAATCATGAAATACCAAACTACACATCAGCCTTGACACTTGAAAGATTTGAGAGAAAGGACCTAGAAAATGCTACTAGTTGTTTCAGCTCAGATAACATCATTGGAGCTAGCAATTTGAGCACTGTTTATAAGGGTCAATTGGGAGATGGCAAGATAGTGGCAATAAAAAAACTCAACTTGGAGCATTTTTCTGCAGAATGTGACAAGCATTTCAAGAGAGAAACAAGCATCTTGAGCCAACTAAGGCATAGGAATTTGGTCAAGGTTCAGGGGTATGCTTGGGAGAGTGGGAAAATAAAGGCTCTAGTTTTGGAGTACATGCGGAATGGGAATTTGGATAGCATAATACATGAAGAAGGGATGATGGATCAAAGTAGATGGACATTATCTGAAAGGCTTAATGTTTTGATTTCTGTTGCTGATGCATTAGATTACTTGCACTCTGGTTATGATATTCCAATTGTGCATTGTGATTTAAAGCCTTCTAATATTCTTTTGGATGGAGATTGGGTGGCTCATGTGAGTGATTTTGGGACAGCTAGAATGCTTGGTCTTCATTTGCAAGATGGTTTTTCTCTGTCCTCGTCAGCTGCTTTCCAAGGCACTGTTGGTTATTTGGCTCCAGAGCTTGCGTACATGAGGAAATCAACGACCAAAGTTGACGTGTTCAGCTTTGGTATAGTGGTAATGGAGTTTCTAACGAGAAGGAGACCAACAGGACTCGCAGAAGAAGATGGCTTGCCCATGAGTCTGCGTGAAATAGTGCAGAAAGCACTTGCCAATACTGGAACAAAGCAACATGTTCTTCAAGTTGTGGATCCTTTGCTCTTTGACAAGGAGCTCCATGAAGATGTCTTAATGGAGCTTTTGAAGCTATCATTGAATTGTACTCTCCCGGATCCTGAAGATCGACCTAGTATGAAACAAGTGTTGCCTGTCTTGATGATGCTTAAGAAGCAAATTTCATAG 3642 0.3998 MAPYRVSYITPLASLFPNILLPTGAFFCENLLQLSLPFFIIPSILMSPKISLTILIVFLLISISTTILSNAESSSLEKVEIEALKAFKSSITHDPNGALSDWVDTTHHCNWSGIACDPSSQHVISITQIGQKLQGKISSILGNLSGLQLLDLTSNSFSGLIPPQLSFCSQLSQLYLVDNSLSGPIPPELVNLKGLQYLDLGSNILTGSLPESLFNCTSLLGIAFNSNNLTGKIPSNIGDLVNVTQIAGFANQFVGSIPPSIGKLEALQSLDFSQNQLSGEIPREIGNLRNLEYLLLFENSLVGKIPSELGQCMNLVNLELYTNKLSGSIPLELGNLVHLRTLRIYDNNFTSTIPSSIFQLKSLTNLGLSENRLEGTISPEIGSLRSLKVLTLHLNKFTGQIPSSITTLSNLTYLSMSQNLLSGKLPSNIGLLHSLKILVLNGNLLHGHIPPSITNCTSLVNVSLSFNSLSGNIPEGFSRISNLTFLSLASNSMSGEIPDDLFNCSNLRTLSLGKNNFSGMLKPAIKNLFNLRTLQLNLNSFTGPIPLEMGNLNQLVTLSLSDNRFSGNIPLELSNLTLLQGLDLQDNALEGTIPNQLFELNQLTVLQLHQNKLVGQISKAFSKLKMLSHLDLHGNMFSGSIPSELSQLNRLLMLDLSQNNLTGSIPGDVIASFRDMQLHLNLSHNHFIGAIPAELGMMEMIQAIDVSNNNLSGVIPKALSGCRNLFNLDISGNNISGPIPAEAFNNMDLLQSLNLSRNHLDGEIPETLAKLEHLISLDLSHNNLEGSISYNFANLSNLKLLNLSFNQLEGQVPSRGIFSHIDASALMGNPALCGTKFLMPCRETTRRSHSLSKKSIYIIASLGSVAVLLILVLVIVFLIQRARSRRSKKLENHEIPNYTSALTLERFERKDLENATSCFSSDNIIGASNLSTVYKGQLGDGKIVAIKKLNLEHFSAECDKHFKRETSILSQLRHRNLVKVQGYAWESGKIKALVLEYMRNGNLDSIIHEEGMMDQSRWTLSERLNVLISVADALDYLHSGYDIPIVHCDLKPSNILLDGDWVAHVSDFGTARMLGLHLQDGFSLSSSAAFQGTVGYLAPELAYMRKSTTKVDVFSFGIVVMEFLTRRRPTGLAEEDGLPMSLREIVQKALANTGTKQHVLQVVDPLLFDKELHEDVLMELLKLSLNCTLPDPEDRPSMKQVLPVLMMLKKQIS 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1524 1213 SUPERFAMILY Protein kinase-like (PK-like) 899 1207 IPR011009 -
Alju03g1524 1213 ProSiteProfiles Protein kinase domain profile. 919 1208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1524 1213 Gene3D Phosphorylase Kinase; domain 1 879 997 - -
Alju03g1524 1213 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 599 1206 - -
Alju03g1524 1213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1045 1057 IPR008271 GO:0004672|GO:0006468
Alju03g1524 1213 Gene3D Ribonuclease Inhibitor 249 434 IPR032675 -
Alju03g1524 1213 Gene3D Transferase(Phosphotransferase) domain 1 998 1213 - -
Alju03g1524 1213 FunFam Leucine-rich repeat receptor-like protein kinase TDR 453 749 - -
Alju03g1524 1213 Pfam Leucine Rich Repeat 195 216 IPR001611 GO:0005515
Alju03g1524 1213 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 879 997 - -
Alju03g1524 1213 Gene3D Ribonuclease Inhibitor 77 248 IPR032675 -
Alju03g1524 1213 CDD STKc_IRAK 925 1206 - -
Alju03g1524 1213 Pfam Protein kinase domain 921 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1524 1213 Pfam Leucine rich repeat 702 760 IPR001611 GO:0005515
Alju03g1524 1213 Pfam Leucine rich repeat 579 636 IPR001611 GO:0005515
Alju03g1524 1213 PRINTS Leucine-rich repeat signature 795 808 - -
Alju03g1524 1213 PRINTS Leucine-rich repeat signature 774 787 - -
Alju03g1524 1213 Pfam Leucine rich repeat N-terminal domain 80 117 IPR013210 -
Alju03g1524 1213 FunFam Leucine-rich repeat receptor-like protein kinase 750 843 - -
Alju03g1524 1213 SMART LRR_typ_2 576 600 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 144 168 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 698 721 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 747 770 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 192 216 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 480 504 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 264 287 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 432 456 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 771 794 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 384 408 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 795 820 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 624 648 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 288 312 IPR003591 -
Alju03g1524 1213 SMART LRR_typ_2 336 360 IPR003591 -
Alju03g1524 1213 SMART LRR_sd22_2 432 464 - -
Alju03g1524 1213 SMART LRR_sd22_2 264 290 - -
Alju03g1524 1213 SMART LRR_sd22_2 408 431 - -
Alju03g1524 1213 SMART LRR_sd22_2 771 797 - -
Alju03g1524 1213 SMART LRR_sd22_2 192 224 - -
Alju03g1524 1213 SMART LRR_sd22_2 552 584 - -
Alju03g1524 1213 SMART serkin_6 919 1205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1524 1213 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 77 231 - -
Alju03g1524 1213 SUPERFAMILY RNI-like 132 446 - -
Alju03g1524 1213 FunFam Leucine-rich receptor-like protein kinase family protein 353 451 - -
Alju03g1524 1213 SUPERFAMILY L domain-like 424 520 - -
Alju03g1524 1213 Gene3D Ribonuclease Inhibitor 435 672 IPR032675 -
Alju03g1524 1213 Gene3D Ribonuclease Inhibitor 673 850 IPR032675 -
Alju03g1524 1213 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 232 331 - -
Alju03g1524 1213 SUPERFAMILY L domain-like 523 851 - -
Alju03g1524 1213 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 998 1213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1524 Alju-ChrAlju03 43711713 43716676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1524 57 1211 Receptor kinase-like Gene Family AT5G46330 52.577 0.0 1127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju03g1524 Pkinase 1.7e-43 CL0016