Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1518 ATGTCTGATGAACCAAGTAAGGAACTTTATTACCAGGATCTTTACTTAGGCCATAGTAATCAGCAGTCCACAGGTGGATCTGCCATGTTCTGTGAGAAGAGTTTCTCTCCCTTTAATATACCTGGCCCTTCATCATCTTCATCAGGCTTTGATGATCCTCCATACATGAGTTTCACTGAATGCCTGCAAGGAGGCCTCGACTACAATTCTCTTGCTACTTCCTTTGGCCTGTCTCCTTCCTCTTCGGAGGTTTTTTCTTCTGTTGAAGGCAACAATAATAATTATCAGAAGCCTTCATCAGAAGGTCATGGAGATTTAGGTCGTGGTGGAAGTGAAACGCCGGTGACCCAGAATTCAACGATCTCTAATTCATCTTCTTCTGAAGCCGGAGCTGAAGAAGAAGAAGACTCAGGGAAGAGCAAGAAAGATAGAGATGAGGTCAAAGCTTCAGAAGAAGGATCTAATAACAAGAAAGGGCAAGCTAAAATTAATGGGAGTGCAACTTATTATAATTACAGGAACAAAGGCAGGAAAAAAGGAGAGAAGATGCGGAAGGAGCCTAGATTTGCTTTCATGACCAAGAGCGAGGTTGACCACCTTGAAGATGGTTATAGATGGAGAAAATATGGACAGAAAGCCGTCAAGAATAGCCCTTACCCAAGAAGCTACTACAGGTGCACGACGCAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATATGAGGATCCAACCACTGTGATAACAACCTATGAGGGTCAGCACAACCATCCTGTCCCCACATCGCTTAGAGGGAATGCGGCTGCCATGTTCACACCTTCTTCTCTCTTAACACCACAACACACTCTGCCCTCCGCCGCAGCCACCGTGGGACACCACGATTTCTTCCTTCACATGCCTCACCACTTCAACACCGCCGCCGCCTCTTATAACAATCTCATTAACACTAGTACCAATAATGCTTCTAATTCTCTTCTTCATCATCAGCTTCAGCAGCAGTATCATCATAATAACCCTCATGACTACGGCCTCCTCCAGGACATTCTCCCTTCCATGTTCCTCAAACAAGATCATCCCTAATATGAAGAAGGCATGAGACGGATCAGTTTTGAGCCGGTTACTGGGCGTCGAGAATGGTTATTCAGGGACCAATCACTCCTGGCCAGTCATTCAGATACCAGTCTTGATGAATTGGGCAAGGGTACAAAGGAAGATGATCAGGTTTTTTTTCTGGAAACAGAGCTTTCCAGACCAGCATCTGCAAAATTCCAAGCTTCATCCATCAAATTAAATATCATTAGGTTCTTTATTATGGATGACTCTTTCTTGCTGGAAAATCAAGCAACTTTGAGGGCAATGTCTGAATTCGGCTTGATTCTGCTTTTTTTCTACCTATGTGACCGCACAAACTTACTGGGAGATTCTATAAAGAGTTATTGTCGACATCTTTTTCTCTTCCTCTACCTCCTTCTGATTATAGTTTCAGCCATGCCTTCATTGAAGAAGCACAGCGACAAATCAGCTTTTTCTGGAAGAAGCATACTTTACCTTAACAGGCATCAAACAGAGGAGTGGAAAGGATGGATGCAGGTCCTCTTTCTAATGTACCATTATTTTACTGCAATGGAGATGTACAATGCAATACGTGTTTTCATTGCTGCATATGTTTGGATGATTGGATTTGGCAACTTCTCCTATTATTATATCCGAAAAGATTTTAGCCTTGCACGCTTTGCTCAGGTCACGTAA 1749 0.4345 MSDEPSKELYYQDLYLGHSNQQSTGGSAMFCEKSFSPFNIPGPSSSSSGFDDPPYMSFTECLQGGLDYNSLATSFGLSPSSSEVFSSVEGNNNNYQKPSSEGHGDLGRGGSETPVTQNSTISNSSSSEAGAEEEEDSGKSKKDRDEVKASEEGSNNKKGQAKINGSATYYNYRNKGRKKGEKMRKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSSLLTPQHTLPSAAATVGHHDFFLHMPHHFNTAAASYNNLINTSTNNASNSLLHHQLQQQYHHNNPHDYGLLQDILPSMFLKQDHPXYEEGMRRISFEPVTGRREWLFRDQSLLASHSDTSLDELGKGTKEDDQVFFLETELSRPASAKFQASSIKLNIIRFFIMDDSFLLENQATLRAMSEFGLILLFFYLCDRTNLLGDSIKSYCRHLFLFLYLLLIIVSAMPSLKKHSDKSAFSGRSILYLNRHQTEEWKGWMQVLFLMYHYFTAMEMYNAIRVFIAAYVWMIGFGNFSYYYIRKDFSLARFAQVT 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1518 582 ProSiteProfiles WRKY domain profile. 195 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1518 582 MobiDBLite consensus disorder prediction 63 100 - -
Alju03g1518 582 Gene3D WRKY domain 183 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1518 582 MobiDBLite consensus disorder prediction 156 171 - -
Alju03g1518 582 FunFam WRKY transcription factor 57 186 260 - -
Alju03g1518 582 Pfam 10 TM Acyl Transferase domain found in Cas1p 447 581 IPR012419 -
Alju03g1518 582 MobiDBLite consensus disorder prediction 132 155 - -
Alju03g1518 582 MobiDBLite consensus disorder prediction 111 128 - -
Alju03g1518 582 Pfam WRKY DNA -binding domain 201 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g1518 582 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 93 318 IPR044810 GO:0003700
Alju03g1518 582 SUPERFAMILY WRKY DNA-binding domain 192 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g1518 582 MobiDBLite consensus disorder prediction 38 53 - -
Alju03g1518 582 MobiDBLite consensus disorder prediction 36 185 - -
Alju03g1518 582 SMART WRKY_cls 200 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1518 Alju-ChrAlju03 43681712 43692020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1518 39 357 WRKY Transcription Factor Family AT4G18170 47.222 9.10e-64 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju03g1518 Cas1_AcylT 6.2e-34 CL0316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1518 03 43681712 43692020 Alju03g1518 03 43681712 43692020 ECH