Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1491 ATGGCGGAAGGGCCGAAGGATTCATCGGGCAAGGAGAAAGTTCCCTTTCATAAGCTCTTTACTTTCGCCGACCGTCGCGACGCCGTTTTTATGGCCATCGGTACGATCTGTGCGGTGGCCAACGGGGTATCACAGCCTCTCATGATACTGATTTTCGGGAAGCTCATCAACACTTTCGGTTCGACCGATCAATCACGCATTGTGCATGAAGTTTCTAAGGTTGCATTACTCTTCGTTTACCTGGCTATTGGTTCTGGCGTTGCTTCATGTCTCCAGGTGGCTAGTTGGATGGTGACAGGAGAAAGGCAAGCCGCAAGGATCCGTGGTTTGTACTTGAAAACAATACTAAGACAGGACATTGCCTTCTTTGACACTGAAACAACCACAGGGGAGGTCATTGGTAGGATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATGCAACTAGCTGCAACTTTTGTTGGTGGGTTTGTGGTTGCCTTTACAAGAGGATGGCTACTTTCTCTGGTTTTGCTCTCATGTCTTCCATTTGTTGTCATTGCTGGTGGAATCGCTTCAATGTTTGTGGCAAAAATGTCAAGTCGTGGACAAGTTGCTTACGCAGAAGCAGGAAATGCGGTTGAACAAACTGTTGGGGCCATTAGAACAGTTGCATCTTTCACTGGGGAGAAGAAAGCAGTAGAAAACTATAATAGCAAGTTGAAAGTTGCCTATAAATCAATGGTTAAACAAGGGATGGCCACTGGGCTTGGATTTGGACTTGTTTTGTTCGTCATCTTCAGCACCTATGGACTTGCAATGTGGTATGGAGCCAAACTGATCCGTGACAGAGGGTATAATGGTGGAGCTGTCATCACTATAATTATGGCGCTGATGATGGGTGGAATGTCACTGGGACAGACATCGCCAAGTCTTAACGCATTTGCAGCAGGTCAAGCTGCTGCATACAAGATGCTTGAGACTATTAAAAGAAGACCGAAAATTGATGCTTATGACATTAATGGGGTTGTATTGGAGGACATCAAGGGAAATATTGAACTCAAAGATGTTTATTTCAGATACCCTGCTAGGCCTGACGTACAGGTTTTTGCTGGATTCTCACTGTGCGTCCCAAGTGGCACAACTACTGCTTTAGTGGGTCAAAGTGGAAGCGGAAAGTCAACTGTAATTAGTTTGTTAGAAAGATTCTATGACCCTGATGCTGGTGAAGTACTTGTAGATGGTGTTAATTTGAGGGACTTTAAACTTAGATGGATAAGAGAAAAGATTGGGCTTGTTAGTCAGGAGCCGATGTTATTTACAGGTACCATAAAAGAAAATATAGCATATGGTAAGGATAACGCAACTGACGAGGAAATAACTACAGCGACAAAGCTTGCCAATGCTGCAAAATTTATTGACAAAATGCCAAAGGGCCTTGATACCTTGGTAGGGGAGCATGGAACTCAACTTTCTGGGGGACAAAAGCAACGGATTGCCATTGCAAGGGCAATTCTGAAGAACCCTAAAATCCTCCTTCTTGATGAAGCAACAAGCGCACTAGATGCTGAGTCTGAACGCATTGTTCAAGATGCATTGGTAAATGTCATGTTAAACAGGACTACCGTGATTGTTGCTCATCGTTTGACAACTATTAGAAATGCTGATGACATAGCAGTGGTGTATCAAGGGAAAATAGTGGAAAAAGGAACTCATGACGAGTTAATCCAGAATCCTGATGGTGCTTATTCTCAGCTTGTTCATCTCCAAGAAGGCGTTGATGAAGCTGAAGAAGGAGAAAAATCTGAAACAGACAAGGCCACTACAAGTTATACAGTCAGAAACATGTCTTCCTCTGAGATCCGAAAATCATCATTGAGACTAATTAGTAGAGGTTCATCAGGAAGGAAATCTTCTCGCTCACTCAACCTTGGTCTTTCTAATCGAACTAATCCATATCGTTCTCTAGAAGGTGGTGATAATCTTGAAAAGACCGAAACTGCTGATGTCAAGCGAAAAGAGGTTTCCATTATGCGTCTGGCCTATTTGAACAAACCTGAGATTCTCGTGCTATTGCTTGGATCTGTTGCTGCTGTAATACATGGCCTAATTTTCCCTATATTTGGCCTCTTACTTTCATCAGCTATCAAAATGTTATATAAACCACCAGAGCAAATGAAGAAAGAATCCAAGTTTTGGGCAGTTCTTTATGTGATTTTGGGTTTGGCTGCTTTCGTGTCTTTACCATTACAAAATTACTTCTTTGGAGTTGCTGGTGGAAAATTAATAGAACGAATTCGTTCTTTGACATTTGAGAAGATTGTGCACCAAGAAATTAGTTGGTTCGATGATCCTGCAAATTCAAGCGGTGCAGTTGGTGCAAGGTTATCTACAGATGCTTCAACAGTGAGAAGTCTTGTTGGTGACACCCTGGCCCTCGTCGTGCAGAACATGGCAACAATAACAACCGGCCTCCTTATAGCATTTATAGCTAATTGGAGACTCTCTTTAGTGGTTCTTGCTGTGTCACCTTTCCTTCTTTTGCAAGGAGTATTTCAAATGAGGTTTCTGAAAGGGTTTAGTGCAGATGCTAAGCTGATGTATGAAGAGGCCAGTCAGGTGGCAAATGATGCAGTTAGTAGCATCAGGACTGTTGCATCATTCTGTGCTGAACCAAAGGTCATGGAAATGTATAGGAAGAAATCTGAAGGGCCAGAAAAACAAGGCATTCGACGAGGTTTTGTTAGTGGTGCAGGTTTTGGCTTCTCTTTCTTTGCTTTGTACTGCGCAAATGCTCTGTGTTTCTACGTGGGAGCCATCTTTATAAAGCAAGAGGTAGCAAATTTTGGAGAGGTTTTCAAGGTTTTCTTTGCTTTAACAATTACAGCATTAGGGGTTTCCCAGACCAGTGCCTTGGCACCAGACACCAACAAAGCCAAGGACTCCACAGCTTCAATATTTGAAATTCTGGACAGTAAACCCAACATTGACTCTAGTAGCGATCAGGGCATGACATTAGATTCTGTAAACGGTGATATTGAATTAAGAAATGTCAGCTTCAAATATCCTACAAGGCCTGATGTTCAAATTTTCAGAGATTTGAACTTAACCATACCATCTGGGAAGACTGTTGCACTGGTTGGAGAAAGTGGAAGTGGAAAATCTACAGTTATTAGCCTCATAGAGAGATTTTACGACCCGGATTCTGGACTCGTACTGCTAGATGGAACCGAAATCAAGAAGCTGAGGCTAAGCTGGTTGAGGCAGCAAACGGGATTGGTCAGCCAAGAGCCAATTCTTTTCAATGAAACCATCCGGGACAACATAGCTTATGGCAAAACAGGAGGTGCCAATGAGGAAGAGATAGTTGCAGCAGCTAAAGCAGCCAACGCATACCAGTTCATAAGCTCACTTCCAAGTGGTTTTGACACTATGGTTGGGGAAAGAGGCACACAATTGTCAGGAGGCCAAAAGCAGAGGATTGCCATTGCAAGAGCAATGTTGAAAGACCCAAAAATCCTGTTGCTTGATGAGGCAACCAGTGCATTGGATGCAGAATCAGAGCGAGTGGTTCAAGAAGCTTTGGACAATGTTATGGTGAACAGAACCACTGTGGTGGTAGCTCATAGGCTCTCAACAATTAAAGGTGCTGATATTATAGCAGTTGTGAAGAATGGAGTGATTGCTGAGAAGGGAAGGCATGAGGCCTTGATGAAGATTGAAGATGGTGTTTATGCTTCCTTGGTTGCTCTCCATATGAGTGCTTCATGA 3774 0.4314 MAEGPKDSSGKEKVPFHKLFTFADRRDAVFMAIGTICAVANGVSQPLMILIFGKLINTFGSTDQSRIVHEVSKVALLFVYLAIGSGVASCLQVASWMVTGERQAARIRGLYLKTILRQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFMQLAATFVGGFVVAFTRGWLLSLVLLSCLPFVVIAGGIASMFVAKMSSRGQVAYAEAGNAVEQTVGAIRTVASFTGEKKAVENYNSKLKVAYKSMVKQGMATGLGFGLVLFVIFSTYGLAMWYGAKLIRDRGYNGGAVITIIMALMMGGMSLGQTSPSLNAFAAGQAAAYKMLETIKRRPKIDAYDINGVVLEDIKGNIELKDVYFRYPARPDVQVFAGFSLCVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLVDGVNLRDFKLRWIREKIGLVSQEPMLFTGTIKENIAYGKDNATDEEITTATKLANAAKFIDKMPKGLDTLVGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVNVMLNRTTVIVAHRLTTIRNADDIAVVYQGKIVEKGTHDELIQNPDGAYSQLVHLQEGVDEAEEGEKSETDKATTSYTVRNMSSSEIRKSSLRLISRGSSGRKSSRSLNLGLSNRTNPYRSLEGGDNLEKTETADVKRKEVSIMRLAYLNKPEILVLLLGSVAAVIHGLIFPIFGLLLSSAIKMLYKPPEQMKKESKFWAVLYVILGLAAFVSLPLQNYFFGVAGGKLIERIRSLTFEKIVHQEISWFDDPANSSGAVGARLSTDASTVRSLVGDTLALVVQNMATITTGLLIAFIANWRLSLVVLAVSPFLLLQGVFQMRFLKGFSADAKLMYEEASQVANDAVSSIRTVASFCAEPKVMEMYRKKSEGPEKQGIRRGFVSGAGFGFSFFALYCANALCFYVGAIFIKQEVANFGEVFKVFFALTITALGVSQTSALAPDTNKAKDSTASIFEILDSKPNIDSSSDQGMTLDSVNGDIELRNVSFKYPTRPDVQIFRDLNLTIPSGKTVALVGESGSGKSTVISLIERFYDPDSGLVLLDGTEIKKLRLSWLRQQTGLVSQEPILFNETIRDNIAYGKTGGANEEEIVAAAKAANAYQFISSLPSGFDTMVGERGTQLSGGQKQRIAIARAMLKDPKILLLDEATSALDAESERVVQEALDNVMVNRTTVVVAHRLSTIKGADIIAVVKNGVIAEKGRHEALMKIEDGVYASLVALHMSAS 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1491 1257 CDD ABC_MTABC3_MDL1_MDL2 353 591 - -
Alju03g1491 1257 CDD ABC_MTABC3_MDL1_MDL2 1014 1250 - -
Alju03g1491 1257 Pfam ABC transporter 374 520 IPR003439 GO:0005524
Alju03g1491 1257 ProSitePatterns ABC transporters family signature. 492 506 IPR017871 GO:0005524|GO:0016887
Alju03g1491 1257 FunFam ABC transporter B family member 9 18 348 - -
Alju03g1491 1257 SUPERFAMILY ABC transporter transmembrane region 680 998 IPR036640 GO:0005524|GO:0016020
Alju03g1491 1257 FunFam ABC transporter B family member 1 343 592 - -
Alju03g1491 1257 ProSitePatterns ABC transporters family signature. 1154 1168 IPR017871 GO:0005524|GO:0016887
Alju03g1491 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1003 1252 IPR027417 -
Alju03g1491 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 32 318 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1491 1257 FunFam ABC transporter B family member 1 1004 1254 - -
Alju03g1491 1257 Gene3D - 343 592 IPR027417 -
Alju03g1491 1257 Gene3D - 1004 1253 IPR027417 -
Alju03g1491 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 344 591 IPR027417 -
Alju03g1491 1257 Gene3D ABC transporter type 1, transmembrane domain 982 1003 IPR036640 GO:0005524|GO:0016020
Alju03g1491 1257 Gene3D ABC transporter type 1, transmembrane domain 672 981 IPR036640 GO:0005524|GO:0016020
Alju03g1491 1257 FunFam ABC transporter B family member 1 672 980 - -
Alju03g1491 1257 Pfam ABC transporter 1033 1182 IPR003439 GO:0005524
Alju03g1491 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 353 589 IPR003439 GO:0005524
Alju03g1491 1257 CDD ABC_6TM_Pgp_ABCB1_D2_like 682 997 - -
Alju03g1491 1257 PANTHER ABC TRANSPORTER B FAMILY 9 592 IPR039421 -
Alju03g1491 1257 Gene3D ABC transporter type 1, transmembrane domain 18 628 IPR036640 GO:0005524|GO:0016020
Alju03g1491 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1014 1251 IPR003439 GO:0005524
Alju03g1491 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 693 979 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1491 1257 SMART AAA_5 1041 1234 IPR003593 GO:0016887
Alju03g1491 1257 SMART AAA_5 380 566 IPR003593 GO:0016887
Alju03g1491 1257 CDD ABC_6TM_Pgp_ABCB1_D1_like 31 314 - -
Alju03g1491 1257 Pfam ABC transporter transmembrane region 693 965 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1491 1257 Pfam ABC transporter transmembrane region 31 301 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju03g1491 1257 MobiDBLite consensus disorder prediction 631 656 - -
Alju03g1491 1257 MobiDBLite consensus disorder prediction 631 666 - -
Alju03g1491 1257 SUPERFAMILY ABC transporter transmembrane region 15 337 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1491 Alju-ChrAlju03 43241026 43246894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1491 694 1256 Calmodulin-binding Proteins AT2G36910 43.386 1.13e-140 459